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Difference between revisions of "TSS:Hg 105060.1"

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Line 2: Line 2:
 
|MRF-2=
 
|MRF-2=
 
|MRF2=
 
|MRF2=
|all_trans=AB527389:-282 BC156570:-282 BC152736:-282 BC056680:-292 ENST00000681100.1:-293 ENST00000279873.12:-293 NM_032199:-293 BC107800:-293 AK296921:-302 ENST00000644638.1:-308
+
|all_trans=HGNC:17362
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 24: Line 24:
 
|nearest_refseq=NM_032199
 
|nearest_refseq=NM_032199
 
|nearest_unigene=Hs.535297
 
|nearest_unigene=Hs.535297
|num_trans=10
+
|num_trans=84159
 
|species=human
 
|species=human
 
|start=61901991
 
|start=61901991

Latest revision as of 19:23, 19 July 2021

Basic information about the TSS


TSS ID:hg_105060.1
Species:human
Chr:chr10
TSS Classification:no
Start:61901991
End:61901996
Strand:+
TSS Score:1
Start of the center position in the TSS region:61901993
End of the center position in the TSS region:61901994



Gene and protein annotation


Transcript_name:AB527389 BC156570 BC152736
Distance:-282
GeneID:84159
HGNC/MGI_ID:HGNC:17362
UniProt_ID:
Gene_name:AT-rich interaction domain 5B
Gene_symbol:ARID5B
Gene_synonyms:FLJ21150 MRF2
Gene_source:HGNC:17362



Transcript annotation


Transcript_name:AB527389 BC156570 BC152736
Distance:-282
Num_trans:84159
All_trans:HGNC:17362



TATA-Box annotation


Distance to TSS:295
Nearest PromoterID:NM_032199
Entrez ID:84159
Nearest Unigene:Hs.535297
Nearest Refseq:NM_032199
Nearest Ensembl:ENSG00000150347
Gene Name:AT-rich interaction domain 5B
Gene Alias:DESRT|MRF-2|MRF2
Gene Description:AT-rich interaction domain 5B
Gene Type:protein-coding
CpG%:0.02
GC%:0.412935
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):