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Difference between revisions of "TSS:Hg 105070.1"

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Line 2: Line 2:
 
|MRF-2=
 
|MRF-2=
 
|MRF2=
 
|MRF2=
|all_trans=LN607831:-6
+
|all_trans=HGNC:17362
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.01
 
|cpg_percent=0.01
 
|distance=-6
 
|distance=-6
|distance_to_tss=39068
+
|distance_to_tss=38623
 
|end=61940327
 
|end=61940327
 
|end_of_center_position=61940323
 
|end_of_center_position=61940323
 
|entrez_id=84159
 
|entrez_id=84159
 
|gc_percent=0.487562
 
|gc_percent=0.487562
|gene_alias=DESRT
+
|gene_alias=DESRT{{!}}MRF-2{{!}}MRF2
 
|gene_description=AT-rich interaction domain 5B
 
|gene_description=AT-rich interaction domain 5B
 
|gene_id=84159
 
|gene_id=84159
Line 24: Line 24:
 
|nearest_refseq=NM_032199
 
|nearest_refseq=NM_032199
 
|nearest_unigene=Hs.535297
 
|nearest_unigene=Hs.535297
|num_trans=1
+
|num_trans=84159
 
|species=human
 
|species=human
 
|start=61940317
 
|start=61940317

Latest revision as of 19:23, 19 July 2021

Basic information about the TSS


TSS ID:hg_105070.1
Species:human
Chr:chr10
TSS Classification:yes
Start:61940317
End:61940327
Strand:+
TSS Score:1
Start of the center position in the TSS region:61940322
End of the center position in the TSS region:61940323



Gene and protein annotation


Transcript_name:LN607831
Distance:-6
GeneID:84159
HGNC/MGI_ID:HGNC:17362
UniProt_ID:A0A0B6XJY6
Gene_name:AT-rich interaction domain 5B
Gene_symbol:ARID5B
Gene_synonyms:FLJ21150 MRF2
Gene_source:HGNC:17362



Transcript annotation


Transcript_name:LN607831
Distance:-6
Num_trans:84159
All_trans:HGNC:17362



TATA-Box annotation


Distance to TSS:38623
Nearest PromoterID:NM_032199
Entrez ID:84159
Nearest Unigene:Hs.535297
Nearest Refseq:NM_032199
Nearest Ensembl:ENSG00000150347
Gene Name:AT-rich interaction domain 5B
Gene Alias:DESRT|MRF-2|MRF2
Gene Description:AT-rich interaction domain 5B
Gene Type:protein-coding
CpG%:0.01
GC%:0.487562
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):