Difference between revisions of "TSS:Hg 10508.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:5249 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=-374 | ||
|distance_to_tss=1343 | |distance_to_tss=1343 | ||
| + | |end=16017451 | ||
| + | |end_of_center_position=16017447 | ||
|entrez_id=27129 | |entrez_id=27129 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias=cvHSP | |gene_alias=cvHSP | ||
|gene_description=heat shock protein family B (small) member 7 | |gene_description=heat shock protein family B (small) member 7 | ||
| − | |gene_name=HSPB7 | + | |gene_id=27129 |
| + | |gene_name=heat shock protein family B (small) member 7 | ||
| + | |gene_source=HGNC:5249 | ||
| + | |gene_symbol=HSPB7 | ||
| + | |gene_synonyms=cvHSP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5249 | ||
|nearest_ensembl=ENSG00000173641 | |nearest_ensembl=ENSG00000173641 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001349688 |
|nearest_refseq=NM_014424 | |nearest_refseq=NM_014424 | ||
|nearest_unigene=Hs.502612 | |nearest_unigene=Hs.502612 | ||
| − | |tata_box= | + | |num_trans=27129 |
| + | |species=human | ||
| + | |start=16017442 | ||
| + | |start_of_center_position=16017446 | ||
| + | |strand=- | ||
| + | |tata_box=30(CCTCATATACAC,+,0.00),73(CCCCAGAAAAGG,-,0.00) | ||
| + | |transcript_name=ENST00000463576.5 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10508.1 | |tss_id=hg_10508.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=C9J5A3 | ||
}} | }} | ||
Latest revision as of 19:23, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 16017446 |
|---|---|
| End of the center position in the TSS region: | 16017447 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000463576.5 |
|---|---|
| Distance: | -374 |
| Num_trans: | 27129 |
| All_trans: | HGNC:5249 |
TATA-Box annotation
| Distance to TSS: | 1343 |
|---|---|
| Nearest PromoterID: | NM_001349688 |
| Entrez ID: | 27129 |
| Nearest Unigene: | Hs.502612 |
| Nearest Refseq: | NM_014424 |
| Nearest Ensembl: | ENSG00000173641 |
| Gene Name: | heat shock protein family B (small) member 7 |
| Gene Alias: | cvHSP |
| Gene Description: | heat shock protein family B (small) member 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 30(CCTCATATACAC,+,0.00),73(CCCCAGAAAAGG,-,0.00) |
