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Difference between revisions of "TSS:Hg 105090.1"

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Line 29: Line 29:
 
|start_of_center_position=62049334
 
|start_of_center_position=62049334
 
|strand=+
 
|strand=+
|transcript_name=NM_001244638
+
|transcript_name=NM_001244638.2
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_105090.1
 
|tss_id=hg_105090.1

Latest revision as of 19:23, 19 July 2021

Basic information about the TSS


TSS ID:hg_105090.1
Species:human
Chr:chr10
TSS Classification:yes
Start:62049331
End:62049338
Strand:+
TSS Score:1
Start of the center position in the TSS region:62049334
End of the center position in the TSS region:62049335



Gene and protein annotation


Transcript_name:NM_001244638.2
Distance:19
GeneID:84159
HGNC/MGI_ID:HGNC:17362
UniProt_ID:Q14865
Gene_name:AT-rich interaction domain 5B
Gene_symbol:ARID5B
Gene_synonyms:FLJ21150 MRF2
Gene_source:HGNC:17362



Transcript annotation


Transcript_name:NM_001244638.2
Distance:19
Num_trans:5
All_trans:NM_001244638:19 BC066345:-89 ENST00000309334.5:-121 BC015120:-121 AK024803:128



TATA-Box annotation


Distance to TSS:-22
Nearest PromoterID:NM_001244638
Entrez ID:84159
Nearest Unigene:Hs.535297
Nearest Refseq:NM_032199
Nearest Ensembl:ENSG00000150347
Gene Name:AT-rich interaction domain 5B
Gene Alias:DESRT|MRF-2|MRF2
Gene Description:AT-rich interaction domain 5B
Gene Type:protein-coding
CpG%:0.04
GC%:0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):