Difference between revisions of "TSS:Hg 10511.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:5249 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=37 | |distance_to_tss=37 | ||
|end=16018756 | |end=16018756 | ||
| + | |end_of_center_position=16018754 | ||
|entrez_id=27129 | |entrez_id=27129 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:5249 | |hgnc_mgi_id=HGNC:5249 | ||
|nearest_ensembl=ENSG00000173641 | |nearest_ensembl=ENSG00000173641 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001349688 |
|nearest_refseq=NM_014424 | |nearest_refseq=NM_014424 | ||
|nearest_unigene=Hs.502612 | |nearest_unigene=Hs.502612 | ||
| − | |num_trans= | + | |num_trans=27129 |
|species=human | |species=human | ||
|start=16018750 | |start=16018750 | ||
| + | |start_of_center_position=16018753 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK057295 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_10511.1 | |tss_id=hg_10511.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 19:24, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16018753 |
|---|---|
| End of the center position in the TSS region: | 16018754 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK057295 |
|---|---|
| Distance: | -34 |
| Num_trans: | 27129 |
| All_trans: | HGNC:5249 |
TATA-Box annotation
| Distance to TSS: | 37 |
|---|---|
| Nearest PromoterID: | NM_001349688 |
| Entrez ID: | 27129 |
| Nearest Unigene: | Hs.502612 |
| Nearest Refseq: | NM_014424 |
| Nearest Ensembl: | ENSG00000173641 |
| Gene Name: | heat shock protein family B (small) member 7 |
| Gene Alias: | cvHSP |
| Gene Description: | heat shock protein family B (small) member 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
