Difference between revisions of "TSS:Hg 10516.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:26717 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance_to_tss=- | + | |distance=248 |
| + | |distance_to_tss=-249 | ||
| + | |end=16073901 | ||
| + | |end_of_center_position=16073900 | ||
|entrez_id=348487 | |entrez_id=348487 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=C1orf117 | |gene_alias=C1orf117 | ||
|gene_description=family with sequence similarity 131 member C | |gene_description=family with sequence similarity 131 member C | ||
| − | |gene_name=FAM131C | + | |gene_id=348487 |
| + | |gene_name=family with sequence similarity 131 member C | ||
| + | |gene_source=HGNC:26717 | ||
| + | |gene_symbol=FAM131C | ||
| + | |gene_synonyms=FLJ36766 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26717 | ||
|nearest_ensembl=ENSG00000185519 | |nearest_ensembl=ENSG00000185519 | ||
|nearest_promoter_id=NM_182623 | |nearest_promoter_id=NM_182623 | ||
|nearest_refseq=NM_182623 | |nearest_refseq=NM_182623 | ||
|nearest_unigene=Hs.126825 | |nearest_unigene=Hs.126825 | ||
| + | |num_trans=348487 | ||
| + | |species=human | ||
| + | |start=16073898 | ||
| + | |start_of_center_position=16073899 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375662.5 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10516.1 | |tss_id=hg_10516.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96AQ9 | ||
}} | }} | ||
Latest revision as of 19:25, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 16073899 |
|---|---|
| End of the center position in the TSS region: | 16073900 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000375662.5 |
|---|---|
| Distance: | 248 |
| Num_trans: | 348487 |
| All_trans: | HGNC:26717 |
TATA-Box annotation
| Distance to TSS: | -249 |
|---|---|
| Nearest PromoterID: | NM_182623 |
| Entrez ID: | 348487 |
| Nearest Unigene: | Hs.126825 |
| Nearest Refseq: | NM_182623 |
| Nearest Ensembl: | ENSG00000185519 |
| Gene Name: | family with sequence similarity 131 member C |
| Gene Alias: | C1orf117 |
| Gene Description: | family with sequence similarity 131 member C |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
