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Difference between revisions of "TSS:Hg 105179.1"

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{{TSSDetail
 
{{TSSDetail
 
|Yip2b=
 
|Yip2b=
|all_trans=BC010040:-12 BC038724:16 BC057832:-17 AK289976:27 ENST00000373758.4:-62 NM_001001330:-62 uc057tnv.1:-62 uc001jmt.3:-62 BC068557:-62 AY562241:111 CU686667:111 HQ447522:111 KJ534927:111 KJ535017:111 KJ535031:111 KJ895854:111
+
|all_trans=HGNC:23711
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.175
 
|cpg_percent=0.175
 
|distance=-12
 
|distance=-12
|distance_to_tss=67
+
|distance_to_tss=29
 
|end=63521435
 
|end=63521435
 +
|end_of_center_position=63521430
 
|entrez_id=221035
 
|entrez_id=221035
 
|gc_percent=0.855721
 
|gc_percent=0.855721
|gene_alias=C10orf74|Yip2b
+
|gene_alias=C10orf74{{!}}Yip2b
 
|gene_description=receptor accessory protein 3
 
|gene_description=receptor accessory protein 3
 
|gene_id=221035
 
|gene_id=221035
Line 22: Line 23:
 
|nearest_refseq=NM_001001330
 
|nearest_refseq=NM_001001330
 
|nearest_unigene=Hs.499833
 
|nearest_unigene=Hs.499833
|num_trans=16
+
|num_trans=221035
 
|species=human
 
|species=human
 
|start=63521424
 
|start=63521424
 +
|start_of_center_position=63521429
 
|strand=+
 
|strand=+
 
|transcript_name=BC010040
 
|transcript_name=BC010040

Latest revision as of 19:25, 19 July 2021

Basic information about the TSS


TSS ID:hg_105179.1
Species:human
Chr:chr10
TSS Classification:yes
Start:63521424
End:63521435
Strand:+
TSS Score:1
Start of the center position in the TSS region:63521429
End of the center position in the TSS region:63521430



Gene and protein annotation


Transcript_name:BC010040
Distance:-12
GeneID:221035
HGNC/MGI_ID:HGNC:23711
UniProt_ID:
Gene_name:receptor accessory protein 3
Gene_symbol:REEP3
Gene_synonyms:Yip2b
Gene_source:HGNC:23711



Transcript annotation


Transcript_name:BC010040
Distance:-12
Num_trans:221035
All_trans:HGNC:23711



TATA-Box annotation


Distance to TSS:29
Nearest PromoterID:NM_001001330
Entrez ID:221035
Nearest Unigene:Hs.499833
Nearest Refseq:NM_001001330
Nearest Ensembl:ENSG00000165476
Gene Name:receptor accessory protein 3
Gene Alias:C10orf74|Yip2b
Gene Description:receptor accessory protein 3
Gene Type:protein-coding
CpG%:0.175
GC%:0.855721
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):