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Difference between revisions of "TSS:Hg 105181.1"

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{{TSSDetail
 
{{TSSDetail
 
|Yip2b=
 
|Yip2b=
|all_trans=AK289976:-23 BC038724:-34 AY562241:47 CU686667:47 HQ447522:47 KJ534927:47 KJ535017:47 KJ535031:47 KJ895854:47 BC010040:-72 BC057832:-77 ENST00000373758.4:-122 NM_001001330:-122 uc057tnv.1:-122 uc001jmt.3:-122 BC068557:-122
+
|all_trans=HGNC:23711
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.13
 
|cpg_percent=0.13
 
|distance=-23
 
|distance=-23
|distance_to_tss=129
+
|distance_to_tss=91
 
|end=63521499
 
|end=63521499
 
|end_of_center_position=63521492
 
|end_of_center_position=63521492
 
|entrez_id=221035
 
|entrez_id=221035
 
|gc_percent=0.761194
 
|gc_percent=0.761194
|gene_alias=C10orf74
+
|gene_alias=C10orf74{{!}}Yip2b
 
|gene_description=receptor accessory protein 3
 
|gene_description=receptor accessory protein 3
 
|gene_id=221035
 
|gene_id=221035
Line 23: Line 23:
 
|nearest_refseq=NM_001001330
 
|nearest_refseq=NM_001001330
 
|nearest_unigene=Hs.499833
 
|nearest_unigene=Hs.499833
|num_trans=16
+
|num_trans=221035
 
|species=human
 
|species=human
 
|start=63521484
 
|start=63521484

Latest revision as of 19:25, 19 July 2021

Basic information about the TSS


TSS ID:hg_105181.1
Species:human
Chr:chr10
TSS Classification:yes
Start:63521484
End:63521499
Strand:+
TSS Score:1
Start of the center position in the TSS region:63521491
End of the center position in the TSS region:63521492



Gene and protein annotation


Transcript_name:AK289976
Distance:-23
GeneID:221035
HGNC/MGI_ID:HGNC:23711
UniProt_ID:A8K1R1
Gene_name:receptor accessory protein 3
Gene_symbol:REEP3
Gene_synonyms:Yip2b
Gene_source:HGNC:23711



Transcript annotation


Transcript_name:AK289976
Distance:-23
Num_trans:221035
All_trans:HGNC:23711



TATA-Box annotation


Distance to TSS:91
Nearest PromoterID:NM_001001330
Entrez ID:221035
Nearest Unigene:Hs.499833
Nearest Refseq:NM_001001330
Nearest Ensembl:ENSG00000165476
Gene Name:receptor accessory protein 3
Gene Alias:C10orf74|Yip2b
Gene Description:receptor accessory protein 3
Gene Type:protein-coding
CpG%:0.13
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):