Difference between revisions of "TSS:Hg 1052.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NR_135115:0 NR_135114:0 AK096098:0 ENST00000437898.1:92 | + | |all_trans=NR_135115:0 NR_135114:0 AK096098:0 ENST00000437898.1:92 LF357177:129 MA592754:129 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=10 | |distance_to_tss=10 | ||
|end=19210409 | |end=19210409 | ||
| + | |end_of_center_position=19210397 | ||
|entrez_id=101927895 | |entrez_id=101927895 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=EMC1 antisense RNA 1 |
| − | |gene_id=101927895 | + | |gene_id=101927895 |
| − | |gene_name= | + | |gene_name=EMC1 antisense RNA 1 |
| − | |gene_source= | + | |gene_source=HGNC:54050 |
| − | |gene_symbol= | + | |gene_symbol=EMC1-AS1 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:54050 |
|nearest_ensembl=ENSG00000230424 | |nearest_ensembl=ENSG00000230424 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_135114 |
|nearest_refseq=NR_135114 | |nearest_refseq=NR_135114 | ||
|nearest_unigene=Hs.660534 | |nearest_unigene=Hs.660534 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=19210383 | |start=19210383 | ||
| + | |start_of_center_position=19210396 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NR_135115 NR_135114 AK096098 | + | |transcript_name=NR_135115.1 NR_135114.1 AK096098 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_1052.1 | |tss_id=hg_1052.1 | ||
Latest revision as of 19:26, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 19210396 |
|---|---|
| End of the center position in the TSS region: | 19210397 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_135115.1 NR_135114.1 AK096098 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | NR_135115:0 NR_135114:0 AK096098:0 ENST00000437898.1:92 LF357177:129 MA592754:129 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NR_135114 |
| Entrez ID: | 101927895 |
| Nearest Unigene: | Hs.660534 |
| Nearest Refseq: | NR_135114 |
| Nearest Ensembl: | ENSG00000230424 |
| Gene Name: | EMC1 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | EMC1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.145 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
