Difference between revisions of "TSS:Hg 105237.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|MAWBP= | |MAWBP= | ||
|MAWDBP= | |MAWDBP= | ||
| − | |all_trans= | + | |all_trans=HGNC:5043 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-4307 |
|end=68337255 | |end=68337255 | ||
| + | |end_of_center_position=68337236 | ||
|entrez_id=64081 | |entrez_id=64081 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| − | |gene_alias=HEL-S-306 | + | |gene_alias=HEL-S-306{{!}}MAWBP{{!}}MAWDBP |
|gene_description=phenazine biosynthesis like protein domain containing | |gene_description=phenazine biosynthesis like protein domain containing | ||
|gene_id=3189 | |gene_id=3189 | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:5043 | |hgnc_mgi_id=HGNC:5043 | ||
|nearest_ensembl=ENSG00000108187 | |nearest_ensembl=ENSG00000108187 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001033083 |
|nearest_refseq=NM_022129 | |nearest_refseq=NM_022129 | ||
|nearest_unigene=Hs.198158 | |nearest_unigene=Hs.198158 | ||
| − | |num_trans= | + | |num_trans=3189 |
|species=human | |species=human | ||
|start=68337215 | |start=68337215 | ||
| + | |start_of_center_position=68337235 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-46(TTTTTTATAGCA,+,0.00) |
|transcript_name=AB528938 | |transcript_name=AB528938 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 19:26, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 68337235 |
|---|---|
| End of the center position in the TSS region: | 68337236 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB528938 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3189 |
| All_trans: | HGNC:5043 |
TATA-Box annotation
| Distance to TSS: | -4307 |
|---|---|
| Nearest PromoterID: | NM_001033083 |
| Entrez ID: | 64081 |
| Nearest Unigene: | Hs.198158 |
| Nearest Refseq: | NM_022129 |
| Nearest Ensembl: | ENSG00000108187 |
| Gene Name: | heterogeneous nuclear ribonucleoprotein H3 |
| Gene Alias: | HEL-S-306|MAWBP|MAWDBP |
| Gene Description: | phenazine biosynthesis like protein domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -46(TTTTTTATAGCA,+,0.00) |
