Difference between revisions of "TSS:Hg 10524.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=39 |entrez_id=1969 |gc_percent=0.681592 |gene_alias=ARCC2|CTPA|CTPP1|CTRCT6|ECK |gene_description=EPH receptor A2 |gene_name=EP...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CTPA= | ||
| + | |CTPP1= | ||
| + | |CTRCT6= | ||
| + | |ECK= | ||
| + | |all_trans=HGNC:3386 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=-1 | ||
| + | |end=16156081 | ||
| + | |end_of_center_position=16156071 | ||
|entrez_id=1969 | |entrez_id=1969 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=ARCC2 | + | |gene_alias=ARCC2{{!}}CTPA{{!}}CTPP1{{!}}CTRCT6{{!}}ECK |
|gene_description=EPH receptor A2 | |gene_description=EPH receptor A2 | ||
| − | |gene_name=EPHA2 | + | |gene_id=1969 |
| + | |gene_name=EPH receptor A2 | ||
| + | |gene_source=HGNC:3386 | ||
| + | |gene_symbol=EPHA2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3386 | ||
|nearest_ensembl=ENSG00000142627 | |nearest_ensembl=ENSG00000142627 | ||
|nearest_promoter_id=NM_001329090 | |nearest_promoter_id=NM_001329090 | ||
|nearest_refseq=NM_004431 | |nearest_refseq=NM_004431 | ||
|nearest_unigene=Hs.171596 | |nearest_unigene=Hs.171596 | ||
| − | |tata_box= | + | |num_trans=1969 |
| + | |species=human | ||
| + | |start=16156059 | ||
| + | |start_of_center_position=16156070 | ||
| + | |strand=- | ||
| + | |tata_box=-85(GCCCCTTTAAAG,-,0.00),-84(CCCCTTTAAAGA,-,0.00),-83(CCCTTTAAAGAC,+,0.00),-83(CCCTTTAAAGAC,-,0.00) | ||
| + | |transcript_name=ENST00000358432.8 AK296788 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10524.1 | |tss_id=hg_10524.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024QZA8 B4DL04 P29317 | ||
}} | }} | ||
Latest revision as of 19:27, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16156070 |
|---|---|
| End of the center position in the TSS region: | 16156071 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000358432.8 AK296788 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1969 |
| All_trans: | HGNC:3386 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001329090 |
| Entrez ID: | 1969 |
| Nearest Unigene: | Hs.171596 |
| Nearest Refseq: | NM_004431 |
| Nearest Ensembl: | ENSG00000142627 |
| Gene Name: | EPH receptor A2 |
| Gene Alias: | ARCC2|CTPA|CTPP1|CTRCT6|ECK |
| Gene Description: | EPH receptor A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -85(GCCCCTTTAAAG,-,0.00),-84(CCCCTTTAAAGA,-,0.00),-83(CCCTTTAAAGAC,+,0.00),-83(CCCTTTAAAGAC,-,0.00) |
