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Difference between revisions of "TSS:Hg 105261.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC108682:-237 ENST00000540210.5:-248 BC130626:-248 BC132725:-248 BC144118:-248 ENST00000494903.2:-251 ENST00000543225.5:-261 ENST00000536012.5:-261 AK307671:-261 BX647943:-261 ENST00000543229.5:-264 ENST00000539539.5:-264 ENST00000265872.11:-264 NR_104262:-264 NM_001282960:-264 NM_001282959:-264 NM_018237:-264 AK292649:-264 AK307704:-264 AK122871:-264 AK299307:-264 AK001701:-267 AY249140:-267 BC058846:-274 ENST00000541012.5:-276 ENST00000543719.5:-277 AK298004:-277 AK307550:-278 ENST00000538031.5:-287 AK023438:-289 AF465616:-289 ENST00000630771.2:-359 ENST00000536391.5:-491
+
|all_trans=HGNC:24236
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 22: Line 22:
 
|nearest_refseq=NM_018237
 
|nearest_refseq=NM_018237
 
|nearest_unigene=Hs.49853
 
|nearest_unigene=Hs.49853
|num_trans=33
+
|num_trans=55749
 
|species=human
 
|species=human
 
|start=68721502
 
|start=68721502

Latest revision as of 19:27, 19 July 2021

Basic information about the TSS


TSS ID:hg_105261.1
Species:human
Chr:chr10
TSS Classification:yes
Start:68721502
End:68721535
Strand:+
TSS Score:1
Start of the center position in the TSS region:68721518
End of the center position in the TSS region:68721519



Gene and protein annotation


Transcript_name:BC108682
Distance:-237
GeneID:55749
HGNC/MGI_ID:HGNC:24236
UniProt_ID:
Gene_name:cell division cycle and apoptosis regulator 1
Gene_symbol:CCAR1
Gene_synonyms:CARP-1 CARP1 FLJ10590
Gene_source:HGNC:24236



Transcript annotation


Transcript_name:BC108682
Distance:-237
Num_trans:55749
All_trans:HGNC:24236



TATA-Box annotation


Distance to TSS:280
Nearest PromoterID:NM_001282960
Entrez ID:55749
Nearest Unigene:Hs.49853
Nearest Refseq:NM_018237
Nearest Ensembl:ENSG00000060339
Gene Name:cell division cycle and apoptosis regulator 1
Gene Alias:-
Gene Description:cell division cycle and apoptosis regulator 1
Gene Type:protein-coding
CpG%:0.11
GC%:0.751244
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):