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Difference between revisions of "TSS:Hg 105263.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC089420:-40 BC026036:-82
+
|all_trans=HGNC:24236
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.015
 
|cpg_percent=0.015
 
|distance=-40
 
|distance=-40
|distance_to_tss=1396
+
|distance_to_tss=1301
 
|end=68722544
 
|end=68722544
 
|end_of_center_position=68722540
 
|end_of_center_position=68722540
Line 19: Line 19:
 
|hgnc_mgi_id=HGNC:24236
 
|hgnc_mgi_id=HGNC:24236
 
|nearest_ensembl=ENSG00000060339
 
|nearest_ensembl=ENSG00000060339
|nearest_promoter_id=NM_018237
+
|nearest_promoter_id=NM_001282960
 
|nearest_refseq=NM_018237
 
|nearest_refseq=NM_018237
 
|nearest_unigene=Hs.49853
 
|nearest_unigene=Hs.49853
|num_trans=2
+
|num_trans=55749
 
|species=human
 
|species=human
 
|start=68722535
 
|start=68722535

Latest revision as of 19:27, 19 July 2021

Basic information about the TSS


TSS ID:hg_105263.1
Species:human
Chr:chr10
TSS Classification:yes
Start:68722535
End:68722544
Strand:+
TSS Score:1
Start of the center position in the TSS region:68722539
End of the center position in the TSS region:68722540



Gene and protein annotation


Transcript_name:BC089420
Distance:-40
GeneID:55749
HGNC/MGI_ID:HGNC:24236
UniProt_ID:
Gene_name:cell division cycle and apoptosis regulator 1
Gene_symbol:CCAR1
Gene_synonyms:CARP-1 CARP1 FLJ10590
Gene_source:HGNC:24236



Transcript annotation


Transcript_name:BC089420
Distance:-40
Num_trans:55749
All_trans:HGNC:24236



TATA-Box annotation


Distance to TSS:1301
Nearest PromoterID:NM_001282960
Entrez ID:55749
Nearest Unigene:Hs.49853
Nearest Refseq:NM_018237
Nearest Ensembl:ENSG00000060339
Gene Name:cell division cycle and apoptosis regulator 1
Gene Alias:-
Gene Description:cell division cycle and apoptosis regulator 1
Gene Type:protein-coding
CpG%:0.015
GC%:0.412935
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):