Difference between revisions of "TSS:Hg 105271.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:23508 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance= | + | |distance=309 |
| − | |distance_to_tss=- | + | |distance_to_tss=-319 |
|end=68827222 | |end=68827222 | ||
| + | |end_of_center_position=68827213 | ||
|entrez_id=219736 | |entrez_id=219736 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:23508 | |hgnc_mgi_id=HGNC:23508 | ||
|nearest_ensembl=ENSG00000165730 | |nearest_ensembl=ENSG00000165730 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001130161 |
|nearest_refseq=NM_152709 | |nearest_refseq=NM_152709 | ||
|nearest_unigene=Hs.37636 | |nearest_unigene=Hs.37636 | ||
| − | |num_trans= | + | |num_trans=219736 |
|species=human | |species=human | ||
|start=68827202 | |start=68827202 | ||
| + | |start_of_center_position=68827212 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000298596.11 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105271.1 | |tss_id=hg_105271.1 | ||
Latest revision as of 19:27, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 68827212 |
|---|---|
| End of the center position in the TSS region: | 68827213 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000298596.11 |
|---|---|
| Distance: | 309 |
| Num_trans: | 219736 |
| All_trans: | HGNC:23508 |
TATA-Box annotation
| Distance to TSS: | -319 |
|---|---|
| Nearest PromoterID: | NM_001130161 |
| Entrez ID: | 219736 |
| Nearest Unigene: | Hs.37636 |
| Nearest Refseq: | NM_152709 |
| Nearest Ensembl: | ENSG00000165730 |
| Gene Name: | storkhead box 1 |
| Gene Alias: | C10orf24 |
| Gene Description: | storkhead box 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
