Difference between revisions of "TSS:Hg 105273.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.175 |distance_to_tss=-2 |entrez_id=219736 |gc_percent=0.81592 |gene_alias=C10orf24 |gene_description=storkhead box 1 |gene_name=STOX1 |gene_type=pro...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:23508 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| + | |distance=0 | ||
|distance_to_tss=-2 | |distance_to_tss=-2 | ||
| + | |end=68827547 | ||
| + | |end_of_center_position=68827535 | ||
|entrez_id=219736 | |entrez_id=219736 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
|gene_alias=C10orf24 | |gene_alias=C10orf24 | ||
|gene_description=storkhead box 1 | |gene_description=storkhead box 1 | ||
| − | |gene_name=STOX1 | + | |gene_id=219736 |
| + | |gene_name=storkhead box 1 | ||
| + | |gene_source=HGNC:23508 | ||
| + | |gene_symbol=STOX1 | ||
| + | |gene_synonyms=FLJ25162 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23508 | ||
|nearest_ensembl=ENSG00000165730 | |nearest_ensembl=ENSG00000165730 | ||
|nearest_promoter_id=NM_001130159 | |nearest_promoter_id=NM_001130159 | ||
|nearest_refseq=NM_152709 | |nearest_refseq=NM_152709 | ||
|nearest_unigene=Hs.37636 | |nearest_unigene=Hs.37636 | ||
| + | |num_trans=219736 | ||
| + | |species=human | ||
| + | |start=68827522 | ||
| + | |start_of_center_position=68827534 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000298596.11 ENST00000399169.8 BC140011 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105273.1 | |tss_id=hg_105273.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q6ZVD7 | ||
}} | }} | ||
Latest revision as of 19:27, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68827534 |
|---|---|
| End of the center position in the TSS region: | 68827535 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000298596.11 ENST00000399169.8 BC140011 |
|---|---|
| Distance: | 0 |
| Num_trans: | 219736 |
| All_trans: | HGNC:23508 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_001130159 |
| Entrez ID: | 219736 |
| Nearest Unigene: | Hs.37636 |
| Nearest Refseq: | NM_152709 |
| Nearest Ensembl: | ENSG00000165730 |
| Gene Name: | storkhead box 1 |
| Gene Alias: | C10orf24 |
| Gene Description: | storkhead box 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
