Difference between revisions of "TSS:Hg 10534.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:29249 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss=- | + | |distance=95 |
| + | |distance_to_tss=-19567 | ||
| + | |end=16256756 | ||
| + | |end_of_center_position=16256750 | ||
|entrez_id=79363 | |entrez_id=79363 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=C1orf89 | + | |gene_alias=C1orf89{{!}}RSG1 |
| − | |gene_description= | + | |gene_description=ciliogenesis and planar polarity effector 2 |
| − | |gene_name= | + | |gene_id=54455 |
| + | |gene_name=F-box protein 42 | ||
| + | |gene_source=HGNC:29249 | ||
| + | |gene_symbol=FBXO42 | ||
| + | |gene_synonyms=Fbx42 KIAA1332 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29249 | ||
|nearest_ensembl=ENSG00000132881 | |nearest_ensembl=ENSG00000132881 | ||
|nearest_promoter_id=NM_030907 | |nearest_promoter_id=NM_030907 | ||
|nearest_refseq=NM_030907 | |nearest_refseq=NM_030907 | ||
|nearest_unigene=Hs.546430 | |nearest_unigene=Hs.546430 | ||
| + | |num_trans=54455 | ||
| + | |species=human | ||
| + | |start=16256743 | ||
| + | |start_of_center_position=16256749 | ||
| + | |strand=- | ||
| + | |transcript_name=BC006174 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10534.1 | |tss_id=hg_10534.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:29, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 16256749 |
|---|---|
| End of the center position in the TSS region: | 16256750 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC006174 |
|---|---|
| Distance: | 95 |
| Num_trans: | 54455 |
| All_trans: | HGNC:29249 |
TATA-Box annotation
| Distance to TSS: | -19567 |
|---|---|
| Nearest PromoterID: | NM_030907 |
| Entrez ID: | 79363 |
| Nearest Unigene: | Hs.546430 |
| Nearest Refseq: | NM_030907 |
| Nearest Ensembl: | ENSG00000132881 |
| Gene Name: | F-box protein 42 |
| Gene Alias: | C1orf89|RSG1 |
| Gene Description: | ciliogenesis and planar polarity effector 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
