Difference between revisions of "TSS:Hg 105380.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |SARA1= | ||
| + | |Sara= | ||
| + | |all_trans=HGNC:1447 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss= | + | |distance=14 |
| + | |distance_to_tss=6863 | ||
| + | |end=70163671 | ||
| + | |end_of_center_position=70163651 | ||
|entrez_id=56681 | |entrez_id=56681 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=SAR1 | + | |gene_alias=SAR1{{!}}SARA1{{!}}Sara{{!}}masra2 |
|gene_description=secretion associated Ras related GTPase 1A | |gene_description=secretion associated Ras related GTPase 1A | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=calmodulin 2 pseudogene 2 | ||
| + | |gene_source=HGNC:1447 | ||
| + | |gene_symbol=CALM2P2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1447 | ||
| + | |masra2= | ||
|nearest_ensembl=ENSG00000079332 | |nearest_ensembl=ENSG00000079332 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001142648 |
|nearest_refseq=NM_020150 | |nearest_refseq=NM_020150 | ||
|nearest_unigene=Hs.499960 | |nearest_unigene=Hs.499960 | ||
| + | |num_trans= | ||
| + | |species=human | ||
| + | |start=70163630 | ||
| + | |start_of_center_position=70163650 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000428512.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105380.1 | |tss_id=hg_105380.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:30, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 70163650 |
|---|---|
| End of the center position in the TSS region: | 70163651 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000428512.1 |
|---|---|
| Distance: | 14 |
| Num_trans: | |
| All_trans: | HGNC:1447 |
TATA-Box annotation
| Distance to TSS: | 6863 |
|---|---|
| Nearest PromoterID: | NM_001142648 |
| Entrez ID: | 56681 |
| Nearest Unigene: | Hs.499960 |
| Nearest Refseq: | NM_020150 |
| Nearest Ensembl: | ENSG00000079332 |
| Gene Name: | calmodulin 2 pseudogene 2 |
| Gene Alias: | SAR1|SARA1|Sara|masra2 |
| Gene Description: | secretion associated Ras related GTPase 1A |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
