Difference between revisions of "TSS:Hg 10546.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 8: | Line 8: | ||
|MSTP2= | |MSTP2= | ||
|MSTP3= | |MSTP3= | ||
| − | |all_trans= | + | |all_trans=HGNC:28170 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| Line 17: | Line 17: | ||
|entrez_id=11209 | |entrez_id=11209 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=MSPL-1 | + | |gene_alias=MSPL-1{{!}}MSPL-2{{!}}MSPL-3{{!}}MSPL1{{!}}MSPL2{{!}}MSPL3{{!}}MSTP1{{!}}MSTP2{{!}}MSTP3 |
|gene_description=macrophage stimulating 1 pseudogene 2 | |gene_description=macrophage stimulating 1 pseudogene 2 | ||
|gene_id=84809 | |gene_id=84809 | ||
| − | |gene_name= | + | |gene_name=CROCC pseudogene 2 |
|gene_source=HGNC:28170 | |gene_source=HGNC:28170 | ||
|gene_symbol=CROCCP2 | |gene_symbol=CROCCP2 | ||
| Line 30: | Line 30: | ||
|nearest_refseq=NR_027504 | |nearest_refseq=NR_027504 | ||
|nearest_unigene=Hs.349110 | |nearest_unigene=Hs.349110 | ||
| − | |num_trans= | + | |num_trans=84809 |
|species=human | |species=human | ||
|start=16644654 | |start=16644654 | ||
|start_of_center_position=16644686 | |start_of_center_position=16644686 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000635081.1 ENST00000362058.2 | + | |transcript_name=ENST00000639456.1 ENST00000635081.1 ENST00000362058.2 AK090414 AK123337 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10546.1 | |tss_id=hg_10546.1 | ||
Latest revision as of 19:31, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 16644686 |
|---|---|
| End of the center position in the TSS region: | 16644687 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000639456.1 ENST00000635081.1 ENST00000362058.2 AK090414 AK123337 |
|---|---|
| Distance: | 0 |
| Num_trans: | 84809 |
| All_trans: | HGNC:28170 |
TATA-Box annotation
| Distance to TSS: | -887 |
|---|---|
| Nearest PromoterID: | NR_027504 |
| Entrez ID: | 11209 |
| Nearest Unigene: | Hs.349110 |
| Nearest Refseq: | NR_027504 |
| Nearest Ensembl: | |
| Gene Name: | CROCC pseudogene 2 |
| Gene Alias: | MSPL-1|MSPL-2|MSPL-3|MSPL1|MSPL2|MSPL3|MSTP1|MSTP2|MSTP3 |
| Gene Description: | macrophage stimulating 1 pseudogene 2 |
| Gene Type: | pseudo |
| CpG%: | 0.15 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
