Difference between revisions of "TSS:Hg 105474.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |C6ST1= | ||
| + | |HSD= | ||
| + | |all_trans=HGNC:1971 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| − | |distance_to_tss= | + | |distance=-141 |
| + | |distance_to_tss=149 | ||
| + | |end=71964552 | ||
| + | |end_of_center_position=71964544 | ||
|entrez_id=9469 | |entrez_id=9469 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=C6ST | + | |gene_alias=C6ST{{!}}C6ST1{{!}}HSD |
|gene_description=carbohydrate sulfotransferase 3 | |gene_description=carbohydrate sulfotransferase 3 | ||
| − | |gene_name=CHST3 | + | |gene_id=9469 |
| + | |gene_name=carbohydrate sulfotransferase 3 | ||
| + | |gene_source=HGNC:1971 | ||
| + | |gene_symbol=CHST3 | ||
| + | |gene_synonyms=C6ST C6ST1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1971 | ||
|nearest_ensembl=ENSG00000122863 | |nearest_ensembl=ENSG00000122863 | ||
|nearest_promoter_id=NM_004273 | |nearest_promoter_id=NM_004273 | ||
|nearest_refseq=NM_004273 | |nearest_refseq=NM_004273 | ||
|nearest_unigene=Hs.158304 | |nearest_unigene=Hs.158304 | ||
| + | |num_trans=9469 | ||
| + | |species=human | ||
| + | |start=71964535 | ||
| + | |start_of_center_position=71964543 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000373115.5 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105474.1 | |tss_id=hg_105474.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q7LGC8 | ||
}} | }} | ||
Latest revision as of 19:32, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 71964543 |
|---|---|
| End of the center position in the TSS region: | 71964544 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000373115.5 |
|---|---|
| Distance: | -141 |
| Num_trans: | 9469 |
| All_trans: | HGNC:1971 |
TATA-Box annotation
| Distance to TSS: | 149 |
|---|---|
| Nearest PromoterID: | NM_004273 |
| Entrez ID: | 9469 |
| Nearest Unigene: | Hs.158304 |
| Nearest Refseq: | NM_004273 |
| Nearest Ensembl: | ENSG00000122863 |
| Gene Name: | carbohydrate sulfotransferase 3 |
| Gene Alias: | C6ST|C6ST1|HSD |
| Gene Description: | carbohydrate sulfotransferase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
