Difference between revisions of "TSS:Hg 105484.1"
From referenceTSS
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|CENP-27= | |CENP-27= | ||
|MSAG= | |MSAG= | ||
| − | |all_trans= | + | |all_trans=HGNC:26976 |
|bA570G20.3= | |bA570G20.3= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=16 |
|end=72216072 | |end=72216072 | ||
| + | |end_of_center_position=72216029 | ||
|entrez_id=119504 | |entrez_id=119504 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=APC16 | + | |gene_alias=APC16{{!}}C10orf104{{!}}CENP-27{{!}}MSAG{{!}}bA570G20.3 |
|gene_description=anaphase promoting complex subunit 16 | |gene_description=anaphase promoting complex subunit 16 | ||
|gene_id=119504 | |gene_id=119504 | ||
| Line 22: | Line 23: | ||
|hgnc_mgi_id=HGNC:26976 | |hgnc_mgi_id=HGNC:26976 | ||
|nearest_ensembl=ENSG00000166295 | |nearest_ensembl=ENSG00000166295 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001242547 |
|nearest_refseq=NM_173473 | |nearest_refseq=NM_173473 | ||
|nearest_unigene=Hs.426296 | |nearest_unigene=Hs.426296 | ||
| − | |num_trans= | + | |num_trans=119504 |
|species=human | |species=human | ||
|start=72215984 | |start=72215984 | ||
| + | |start_of_center_position=72216028 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000615507.4 ENST00000621663.4 ENST00000478193.5 | + | |transcript_name=ENST00000615507.4 ENST00000621663.4 ENST00000299381.5 ENST00000478193.5 EU552924 BC009530 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105484.1 | |tss_id=hg_105484.1 | ||
Latest revision as of 19:32, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 72216028 |
|---|---|
| End of the center position in the TSS region: | 72216029 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000615507.4 ENST00000621663.4 ENST00000299381.5 ENST00000478193.5 EU552924 BC009530 |
|---|---|
| Distance: | 0 |
| Num_trans: | 119504 |
| All_trans: | HGNC:26976 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_001242547 |
| Entrez ID: | 119504 |
| Nearest Unigene: | Hs.426296 |
| Nearest Refseq: | NM_173473 |
| Nearest Ensembl: | ENSG00000166295 |
| Gene Name: | anaphase promoting complex subunit 16 |
| Gene Alias: | APC16|C10orf104|CENP-27|MSAG|bA570G20.3 |
| Gene Description: | anaphase promoting complex subunit 16 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
