Difference between revisions of "TSS:Hg 10551.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NR_135056:0 NR_135057:0 | + | |all_trans=NR_135056:0 NR_135057:0 ENST00000660464.1:-17 ENST00000654227.1:-34 ENST00000422124.1:71 ENST00000666544.1:-105 ENST00000416869.1:-158 ENST00000457075.1:-165 NR_135058:-182 NR_135059:-182 BC070363:-182 ENST00000671472.1:-222 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=14 | |distance_to_tss=14 | ||
|end=16889484 | |end=16889484 | ||
| + | |end_of_center_position=16889464 | ||
|entrez_id=105376805 | |entrez_id=105376805 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000238142 | |nearest_ensembl=ENSG00000238142 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_135056 |
|nearest_refseq=NR_135056 | |nearest_refseq=NR_135056 | ||
|nearest_unigene=Hs.465405 | |nearest_unigene=Hs.465405 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=16889443 | |start=16889443 | ||
| + | |start_of_center_position=16889463 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NR_135056 NR_135057 | + | |transcript_name=NR_135056.1 NR_135057.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10551.1 | |tss_id=hg_10551.1 | ||
Latest revision as of 19:32, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16889463 |
|---|---|
| End of the center position in the TSS region: | 16889464 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_135056.1 NR_135057.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | NR_135056:0 NR_135057:0 ENST00000660464.1:-17 ENST00000654227.1:-34 ENST00000422124.1:71 ENST00000666544.1:-105 ENST00000416869.1:-158 ENST00000457075.1:-165 NR_135058:-182 NR_135059:-182 BC070363:-182 ENST00000671472.1:-222 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NR_135056 |
| Entrez ID: | 105376805 |
| Nearest Unigene: | Hs.465405 |
| Nearest Refseq: | NR_135056 |
| Nearest Ensembl: | ENSG00000238142 |
| Gene Name: | uncharacterized LOC105376805 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC105376805 |
| Gene Type: | ncRNA |
| CpG%: | 0.09 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
