Difference between revisions of "TSS:Hg 105515.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:29953 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-159 |
|end=72893587 | |end=72893587 | ||
| + | |end_of_center_position=72893580 | ||
|entrez_id=170392 | |entrez_id=170392 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:29953 | |hgnc_mgi_id=HGNC:29953 | ||
|nearest_ensembl=ENSG00000138315 | |nearest_ensembl=ENSG00000138315 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_152635 |
|nearest_refseq=NM_152635 | |nearest_refseq=NM_152635 | ||
|nearest_unigene=Hs.8366 | |nearest_unigene=Hs.8366 | ||
| − | |num_trans= | + | |num_trans=170392 |
|species=human | |species=human | ||
|start=72893572 | |start=72893572 | ||
| + | |start_of_center_position=72893579 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000622652.1 AK096435 BC126440 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105515.1 | |tss_id=hg_105515.1 | ||
Latest revision as of 19:32, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 72893579 |
|---|---|
| End of the center position in the TSS region: | 72893580 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000622652.1 AK096435 BC126440 |
|---|---|
| Distance: | 0 |
| Num_trans: | 170392 |
| All_trans: | HGNC:29953 |
TATA-Box annotation
| Distance to TSS: | -159 |
|---|---|
| Nearest PromoterID: | NM_152635 |
| Entrez ID: | 170392 |
| Nearest Unigene: | Hs.8366 |
| Nearest Refseq: | NM_152635 |
| Nearest Ensembl: | ENSG00000138315 |
| Gene Name: | oncoprotein induced transcript 3 |
| Gene Alias: | LZP |
| Gene Description: | oncoprotein induced transcript 3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
