Difference between revisions of "TSS:Hg 105517.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:29953 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss= | + | |distance=-10 |
| + | |distance_to_tss=17 | ||
| + | |end=72893763 | ||
| + | |end_of_center_position=72893756 | ||
|entrez_id=170392 | |entrez_id=170392 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
|gene_alias=LZP | |gene_alias=LZP | ||
|gene_description=oncoprotein induced transcript 3 | |gene_description=oncoprotein induced transcript 3 | ||
| − | |gene_name=OIT3 | + | |gene_id=170392 |
| + | |gene_name=oncoprotein induced transcript 3 | ||
| + | |gene_source=HGNC:29953 | ||
| + | |gene_symbol=OIT3 | ||
| + | |gene_synonyms=FLJ39116 LZP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29953 | ||
|nearest_ensembl=ENSG00000138315 | |nearest_ensembl=ENSG00000138315 | ||
|nearest_promoter_id=NR_130125 | |nearest_promoter_id=NR_130125 | ||
|nearest_refseq=NM_152635 | |nearest_refseq=NM_152635 | ||
|nearest_unigene=Hs.8366 | |nearest_unigene=Hs.8366 | ||
| − | |tata_box= | + | |num_trans=170392 |
| + | |species=human | ||
| + | |start=72893748 | ||
| + | |start_of_center_position=72893755 | ||
| + | |strand=+ | ||
| + | |tata_box=-51(GGCCTTAAAAAA,-,0.00) | ||
| + | |transcript_name=ENST00000334011.10 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105517.1 | |tss_id=hg_105517.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8WWZ8 | ||
}} | }} | ||
Latest revision as of 19:33, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 72893755 |
|---|---|
| End of the center position in the TSS region: | 72893756 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000334011.10 |
|---|---|
| Distance: | -10 |
| Num_trans: | 170392 |
| All_trans: | HGNC:29953 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NR_130125 |
| Entrez ID: | 170392 |
| Nearest Unigene: | Hs.8366 |
| Nearest Refseq: | NM_152635 |
| Nearest Ensembl: | ENSG00000138315 |
| Gene Name: | oncoprotein induced transcript 3 |
| Gene Alias: | LZP |
| Gene Description: | oncoprotein induced transcript 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -51(GGCCTTAAAAAA,-,0.00) |
