Difference between revisions of "TSS:Hg 105535.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:50750 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-31 | |distance_to_tss=-31 | ||
|end=73495727 | |end=73495727 | ||
| + | |end_of_center_position=73495722 | ||
|entrez_id=101929145 | |entrez_id=101929145 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:50750 | |hgnc_mgi_id=HGNC:50750 | ||
|nearest_ensembl=ENSG00000221817 | |nearest_ensembl=ENSG00000221817 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_132104 |
|nearest_refseq=NR_132103 | |nearest_refseq=NR_132103 | ||
|nearest_unigene=Hs.434502 | |nearest_unigene=Hs.434502 | ||
| − | |num_trans= | + | |num_trans=101929145 |
|species=human | |species=human | ||
|start=73495715 | |start=73495715 | ||
| + | |start_of_center_position=73495721 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000620559.2 ENST00000442133.9 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105535.1 | |tss_id=hg_105535.1 | ||
Latest revision as of 19:33, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 73495721 |
|---|---|
| End of the center position in the TSS region: | 73495722 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000620559.2 ENST00000442133.9 |
|---|---|
| Distance: | 0 |
| Num_trans: | 101929145 |
| All_trans: | HGNC:50750 |
TATA-Box annotation
| Distance to TSS: | -31 |
|---|---|
| Nearest PromoterID: | NR_132104 |
| Entrez ID: | 101929145 |
| Nearest Unigene: | Hs.434502 |
| Nearest Refseq: | NR_132103 |
| Nearest Ensembl: | ENSG00000221817 |
| Gene Name: | PPP3CB antisense RNA 1 (head to head) |
| Gene Alias: | USP54-AS1 |
| Gene Description: | PPP3CB antisense RNA 1 (head to head) |
| Gene Type: | ncRNA |
| CpG%: | 0.07 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
