Difference between revisions of "TSS:Hg 10559.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
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|MAGP-1= | |MAGP-1= | ||
|MAGP1= | |MAGP1= | ||
| − | |all_trans= | + | |all_trans=HGNC:7033 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-15 |
|end=16980662 | |end=16980662 | ||
| + | |end_of_center_position=16980635 | ||
|entrez_id=4237 | |entrez_id=4237 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| − | |gene_alias=MAGP | + | |gene_alias=MAGP{{!}}MAGP-1{{!}}MAGP1 |
| − | |gene_description= | + | |gene_description=microfibril associated protein 2 |
|gene_id=4237 | |gene_id=4237 | ||
| − | |gene_name= | + | |gene_name=microfibril associated protein 2 |
|gene_source=HGNC:7033 | |gene_source=HGNC:7033 | ||
|gene_symbol=MFAP2 | |gene_symbol=MFAP2 | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:7033 | |hgnc_mgi_id=HGNC:7033 | ||
|nearest_ensembl=ENSG00000117122 | |nearest_ensembl=ENSG00000117122 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_002403 |
|nearest_refseq=NM_002403 | |nearest_refseq=NM_002403 | ||
|nearest_unigene=Hs.389137 | |nearest_unigene=Hs.389137 | ||
| − | |num_trans= | + | |num_trans=4237 |
|species=human | |species=human | ||
|start=16980607 | |start=16980607 | ||
| + | |start_of_center_position=16980634 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000490075.5 ENST00000476788.5 | + | |transcript_name=ENST00000375535.4 ENST00000490075.5 ENST00000476788.5 AK222751 BC028033 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10559.1 | |tss_id=hg_10559.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A024RA94 P55001 |
}} | }} | ||
Latest revision as of 19:34, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 16980634 |
|---|---|
| End of the center position in the TSS region: | 16980635 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375535.4 ENST00000490075.5 ENST00000476788.5 AK222751 BC028033 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4237 |
| All_trans: | HGNC:7033 |
TATA-Box annotation
| Distance to TSS: | -15 |
|---|---|
| Nearest PromoterID: | NM_002403 |
| Entrez ID: | 4237 |
| Nearest Unigene: | Hs.389137 |
| Nearest Refseq: | NM_002403 |
| Nearest Ensembl: | ENSG00000117122 |
| Gene Name: | microfibril associated protein 2 |
| Gene Alias: | MAGP|MAGP-1|MAGP1 |
| Gene Description: | microfibril associated protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
