Difference between revisions of "TSS:Hg 105612.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |SMSr= | ||
| + | |all_trans=HGNC:26320 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance_to_tss= | + | |distance=-3 |
| + | |distance_to_tss=-17 | ||
| + | |end=75111640 | ||
| + | |end_of_center_position=75111639 | ||
|entrez_id=142891 | |entrez_id=142891 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=HEL-177 | + | |gene_alias=HEL-177{{!}}SMSr |
|gene_description=sterile alpha motif domain containing 8 | |gene_description=sterile alpha motif domain containing 8 | ||
| − | |gene_name=SAMD8 | + | |gene_id=142891 |
| + | |gene_name=sterile alpha motif domain containing 8 | ||
| + | |gene_source=HGNC:26320 | ||
| + | |gene_symbol=SAMD8 | ||
| + | |gene_synonyms=FLJ25082 SMSr | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26320 | ||
|nearest_ensembl=ENSG00000156671 | |nearest_ensembl=ENSG00000156671 | ||
|nearest_promoter_id=NM_144660 | |nearest_promoter_id=NM_144660 | ||
|nearest_refseq=NM_144660 | |nearest_refseq=NM_144660 | ||
|nearest_unigene=Hs.744986 | |nearest_unigene=Hs.744986 | ||
| + | |num_trans=142891 | ||
| + | |species=human | ||
| + | |start=75111637 | ||
| + | |start_of_center_position=75111638 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000671800.1 BC080593 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105612.1 | |tss_id=hg_105612.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96LT4 | ||
}} | }} | ||
Latest revision as of 19:34, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 75111638 |
|---|---|
| End of the center position in the TSS region: | 75111639 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000671800.1 BC080593 |
|---|---|
| Distance: | -3 |
| Num_trans: | 142891 |
| All_trans: | HGNC:26320 |
TATA-Box annotation
| Distance to TSS: | -17 |
|---|---|
| Nearest PromoterID: | NM_144660 |
| Entrez ID: | 142891 |
| Nearest Unigene: | Hs.744986 |
| Nearest Refseq: | NM_144660 |
| Nearest Ensembl: | ENSG00000156671 |
| Gene Name: | sterile alpha motif domain containing 8 |
| Gene Alias: | HEL-177|SMSr |
| Gene Description: | sterile alpha motif domain containing 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
