Difference between revisions of "TSS:Hg 105622.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:12672 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=0 | ||
|distance_to_tss=867 | |distance_to_tss=867 | ||
| + | |end=75211037 | ||
| + | |end_of_center_position=75211021 | ||
|entrez_id=7417 | |entrez_id=7417 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
|gene_alias=POR | |gene_alias=POR | ||
|gene_description=voltage dependent anion channel 2 | |gene_description=voltage dependent anion channel 2 | ||
| − | |gene_name=VDAC2 | + | |gene_id=7417 |
| + | |gene_name=voltage dependent anion channel 2 | ||
| + | |gene_source=HGNC:12672 | ||
| + | |gene_symbol=VDAC2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:12672 | ||
|nearest_ensembl=ENSG00000165637 | |nearest_ensembl=ENSG00000165637 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001184823 |
|nearest_refseq=NM_003375 | |nearest_refseq=NM_003375 | ||
|nearest_unigene=Hs.355927 | |nearest_unigene=Hs.355927 | ||
| + | |num_trans=7417 | ||
| + | |species=human | ||
| + | |start=75211004 | ||
| + | |start_of_center_position=75211020 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000447677.5 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105622.1 | |tss_id=hg_105622.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5JSD1 | ||
}} | }} | ||
Latest revision as of 19:35, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 75211020 |
|---|---|
| End of the center position in the TSS region: | 75211021 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000447677.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7417 |
| All_trans: | HGNC:12672 |
TATA-Box annotation
| Distance to TSS: | 867 |
|---|---|
| Nearest PromoterID: | NM_001184823 |
| Entrez ID: | 7417 |
| Nearest Unigene: | Hs.355927 |
| Nearest Refseq: | NM_003375 |
| Nearest Ensembl: | ENSG00000165637 |
| Gene Name: | voltage dependent anion channel 2 |
| Gene Alias: | POR |
| Gene Description: | voltage dependent anion channel 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
