Difference between revisions of "TSS:Hg 10566.1"
From referenceTSS
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|KRPPD= | |KRPPD= | ||
|PARK9= | |PARK9= | ||
| − | |all_trans= | + | |all_trans=HGNC:30213 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| − | |distance= | + | |distance=41 |
| − | |distance_to_tss=- | + | |distance_to_tss=-46 |
|end=17011979 | |end=17011979 | ||
|end_of_center_position=17011974 | |end_of_center_position=17011974 | ||
|entrez_id=23400 | |entrez_id=23400 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=CLN12 | + | |gene_alias=CLN12{{!}}HSA9947{{!}}KRPPD{{!}}PARK9{{!}}SPG78 |
| − | |gene_description=ATPase 13A2 | + | |gene_description=ATPase cation transporting 13A2 |
|gene_id=23400 | |gene_id=23400 | ||
| − | |gene_name=ATPase 13A2 | + | |gene_name=ATPase cation transporting 13A2 |
|gene_source=HGNC:30213 | |gene_source=HGNC:30213 | ||
|gene_symbol=ATP13A2 | |gene_symbol=ATP13A2 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:30213 | |hgnc_mgi_id=HGNC:30213 | ||
|nearest_ensembl=ENSG00000159363 | |nearest_ensembl=ENSG00000159363 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_022089 |
|nearest_refseq=NM_022089 | |nearest_refseq=NM_022089 | ||
|nearest_unigene=Hs.128866 | |nearest_unigene=Hs.128866 | ||
| − | |num_trans= | + | |num_trans=23400 |
|species=human | |species=human | ||
|start=17011968 | |start=17011968 | ||
|start_of_center_position=17011973 | |start_of_center_position=17011973 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000326735.13 ENST00000452699.5 AK290210 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10566.1 | |tss_id=hg_10566.1 | ||
Latest revision as of 19:35, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 17011973 |
|---|---|
| End of the center position in the TSS region: | 17011974 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000326735.13 ENST00000452699.5 AK290210 |
|---|---|
| Distance: | 41 |
| Num_trans: | 23400 |
| All_trans: | HGNC:30213 |
TATA-Box annotation
| Distance to TSS: | -46 |
|---|---|
| Nearest PromoterID: | NM_022089 |
| Entrez ID: | 23400 |
| Nearest Unigene: | Hs.128866 |
| Nearest Refseq: | NM_022089 |
| Nearest Ensembl: | ENSG00000159363 |
| Gene Name: | ATPase cation transporting 13A2 |
| Gene Alias: | CLN12|HSA9947|KRPPD|PARK9|SPG78 |
| Gene Description: | ATPase cation transporting 13A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
