Difference between revisions of "TSS:Hg 105680.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:31430 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-69427 | |distance_to_tss=-69427 | ||
|end=78179216 | |end=78179216 | ||
| + | |end_of_center_position=78179199 | ||
|entrez_id=100132987 | |entrez_id=100132987 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 856 | |gene_description=long intergenic non-protein coding RNA 856 | ||
| − | |gene_id= | + | |gene_id=414243 |
| − | |gene_name=long intergenic non-protein coding RNA | + | |gene_name=long intergenic non-protein coding RNA 595 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:31430 |
| − | |gene_symbol= | + | |gene_symbol=LINC00595 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:31430 |
|nearest_ensembl=ENSG00000230417 | |nearest_ensembl=ENSG00000230417 | ||
|nearest_promoter_id=NR_038985 | |nearest_promoter_id=NR_038985 | ||
|nearest_refseq=NR_038985 | |nearest_refseq=NR_038985 | ||
|nearest_unigene=Hs.55047 | |nearest_unigene=Hs.55047 | ||
| − | |num_trans= | + | |num_trans=414243 |
|species=human | |species=human | ||
|start=78179180 | |start=78179180 | ||
| + | |start_of_center_position=78179198 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000635422.1 ENST00000634946.1 ENST00000635180.1 ENST00000634389.1 ENST00000635520.1 ENST00000635545.1 | |transcript_name=ENST00000635422.1 ENST00000634946.1 ENST00000635180.1 ENST00000634389.1 ENST00000635520.1 ENST00000635545.1 | ||
Latest revision as of 19:36, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 78179198 |
|---|---|
| End of the center position in the TSS region: | 78179199 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000635422.1 ENST00000634946.1 ENST00000635180.1 ENST00000634389.1 ENST00000635520.1 ENST00000635545.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 414243 |
| All_trans: | HGNC:31430 |
TATA-Box annotation
| Distance to TSS: | -69427 |
|---|---|
| Nearest PromoterID: | NR_038985 |
| Entrez ID: | 100132987 |
| Nearest Unigene: | Hs.55047 |
| Nearest Refseq: | NR_038985 |
| Nearest Ensembl: | ENSG00000230417 |
| Gene Name: | long intergenic non-protein coding RNA 595 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 856 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
