Difference between revisions of "TSS:Hg 105707.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
|TRAFIP10= | |TRAFIP10= | ||
|ZIMP10= | |ZIMP10= | ||
| − | |all_trans= | + | |all_trans=HGNC:16493 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=7 | |distance=7 | ||
| − | |distance_to_tss= | + | |distance_to_tss=57 |
|end=79069028 | |end=79069028 | ||
| + | |end_of_center_position=79069023 | ||
|entrez_id=57178 | |entrez_id=57178 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=MIZ | + | |gene_alias=MIZ{{!}}RAI17{{!}}TRAFIP10{{!}}ZIMP10 |
|gene_description=zinc finger MIZ-type containing 1 | |gene_description=zinc finger MIZ-type containing 1 | ||
|gene_id=57178 | |gene_id=57178 | ||
| Line 25: | Line 26: | ||
|nearest_refseq=NM_020338 | |nearest_refseq=NM_020338 | ||
|nearest_unigene=Hs.193118 | |nearest_unigene=Hs.193118 | ||
| − | |num_trans= | + | |num_trans=57178 |
|species=human | |species=human | ||
|start=79069017 | |start=79069017 | ||
| + | |start_of_center_position=79069022 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC007288 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105707.1 | |tss_id=hg_105707.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0JLS3 | + | |uniprot_id=A0JLS3 |
}} | }} | ||
Latest revision as of 19:37, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 79069022 |
|---|---|
| End of the center position in the TSS region: | 79069023 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC007288 |
|---|---|
| Distance: | 7 |
| Num_trans: | 57178 |
| All_trans: | HGNC:16493 |
TATA-Box annotation
| Distance to TSS: | 57 |
|---|---|
| Nearest PromoterID: | NM_020338 |
| Entrez ID: | 57178 |
| Nearest Unigene: | Hs.193118 |
| Nearest Refseq: | NM_020338 |
| Nearest Ensembl: | ENSG00000108175 |
| Gene Name: | zinc finger MIZ-type containing 1 |
| Gene Alias: | MIZ|RAI17|TRAFIP10|ZIMP10 |
| Gene Description: | zinc finger MIZ-type containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
