Difference between revisions of "TSS:Hg 105732.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
|Cyp-D= | |Cyp-D= | ||
|CypD= | |CypD= | ||
| − | |all_trans= | + | |all_trans=HGNC:16493 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
|distance=199 | |distance=199 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-104024 |
|end=79243469 | |end=79243469 | ||
|end_of_center_position=79243445 | |end_of_center_position=79243445 | ||
|entrez_id=10105 | |entrez_id=10105 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=CYP3 | + | |gene_alias=CYP3{{!}}CyP-M{{!}}Cyp-D{{!}}CypD |
|gene_description=peptidylprolyl isomerase F | |gene_description=peptidylprolyl isomerase F | ||
|gene_id=57178 | |gene_id=57178 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_005729 | |nearest_refseq=NM_005729 | ||
|nearest_unigene=Hs.381072 | |nearest_unigene=Hs.381072 | ||
| − | |num_trans= | + | |num_trans=57178 |
|species=human | |species=human | ||
|start=79243420 | |start=79243420 | ||
| Line 31: | Line 31: | ||
|strand=+ | |strand=+ | ||
|transcript_name=AB033050 | |transcript_name=AB033050 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_105732.1 | |tss_id=hg_105732.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:37, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 79243444 |
|---|---|
| End of the center position in the TSS region: | 79243445 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB033050 |
|---|---|
| Distance: | 199 |
| Num_trans: | 57178 |
| All_trans: | HGNC:16493 |
TATA-Box annotation
| Distance to TSS: | -104024 |
|---|---|
| Nearest PromoterID: | NM_005729 |
| Entrez ID: | 10105 |
| Nearest Unigene: | Hs.381072 |
| Nearest Refseq: | NM_005729 |
| Nearest Ensembl: | ENSG00000108179 |
| Gene Name: | zinc finger MIZ-type containing 1 |
| Gene Alias: | CYP3|CyP-M|Cyp-D|CypD |
| Gene Description: | peptidylprolyl isomerase F |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
