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Difference between revisions of "TSS:Hg 105859.1"

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{{TSSDetail
 
{{TSSDetail
 
|PAMM=
 
|PAMM=
|all_trans=AY359059:-43 AK315440:-44 ENST00000606162.6:-85 NM_001243781:-85 NM_032333:-85 AK074643:-94 LF210018:-107 MA445595:-107 ENST00000372185.5:-142 AK075447:-142 ENST00000615554.4:-150 NM_001243780:-150 LF212565:-180 MA448142:-180
+
|all_trans=HGNC:28651
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.12
 
|cpg_percent=0.12
Line 23: Line 23:
 
|nearest_refseq=NM_032333
 
|nearest_refseq=NM_032333
 
|nearest_unigene=Hs.500333
 
|nearest_unigene=Hs.500333
|num_trans=14
+
|num_trans=84293
 
|species=human
 
|species=human
 
|start=80408635
 
|start=80408635

Latest revision as of 19:40, 19 July 2021

Basic information about the TSS


TSS ID:hg_105859.1
Species:human
Chr:chr10
TSS Classification:yes
Start:80408635
End:80408647
Strand:+
TSS Score:1
Start of the center position in the TSS region:80408641
End of the center position in the TSS region:80408642



Gene and protein annotation


Transcript_name:AY359059
Distance:-43
GeneID:84293
HGNC/MGI_ID:HGNC:28651
UniProt_ID:
Gene_name:peroxiredoxin like 2A
Gene_symbol:PRXL2A
Gene_synonyms:Adrx MGC4248 PAMM
Gene_source:HGNC:28651



Transcript annotation


Transcript_name:AY359059
Distance:-43
Num_trans:84293
All_trans:HGNC:28651



TATA-Box annotation


Distance to TSS:90
Nearest PromoterID:NM_001243781
Entrez ID:84293
Nearest Unigene:Hs.500333
Nearest Refseq:NM_032333
Nearest Ensembl:ENSG00000122378
Gene Name:peroxiredoxin like 2A
Gene Alias:Adrx|C10orf58|FAM213A|PAMM
Gene Description:peroxiredoxin like 2A
Gene Type:protein-coding
CpG%:0.12
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):