Difference between revisions of "TSS:Hg 105872.1"
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{{TSSDetail | {{TSSDetail | ||
|TM4SF14= | |TM4SF14= | ||
| − | |all_trans= | + | |all_trans=HGNC:23303 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.195 | |cpg_percent=0.195 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=4 |
|end=80454331 | |end=80454331 | ||
|end_of_center_position=80454314 | |end_of_center_position=80454314 | ||
|entrez_id=81619 | |entrez_id=81619 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
| − | |gene_alias=DC-TM4F2 | + | |gene_alias=DC-TM4F2{{!}}TM4SF14{{!}}tspan-14 |
|gene_description=tetraspanin 14 | |gene_description=tetraspanin 14 | ||
|gene_id=81619 | |gene_id=81619 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:23303 | |hgnc_mgi_id=HGNC:23303 | ||
|nearest_ensembl=ENSG00000108219 | |nearest_ensembl=ENSG00000108219 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351267 |
|nearest_refseq=NM_030927 | |nearest_refseq=NM_030927 | ||
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.308615 |
| − | |num_trans= | + | |num_trans=81619 |
|species=human | |species=human | ||
|start=80454296 | |start=80454296 | ||
|start_of_center_position=80454313 | |start_of_center_position=80454313 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000372157.6 ENST00000469149.1 ENST00000372164.7 | + | |transcript_name=ENST00000372158.6 ENST00000372157.6 ENST00000469149.1 ENST00000372164.7 AK295321 AL136638 AK074558 AF311903 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105872.1 | |tss_id=hg_105872.1 | ||
Latest revision as of 19:40, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 80454313 |
|---|---|
| End of the center position in the TSS region: | 80454314 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000372158.6 ENST00000372157.6 ENST00000469149.1 ENST00000372164.7 AK295321 AL136638 AK074558 AF311903 |
|---|---|
| Distance: | 0 |
| Num_trans: | 81619 |
| All_trans: | HGNC:23303 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001351267 |
| Entrez ID: | 81619 |
| Nearest Unigene: | Hs.308615 |
| Nearest Refseq: | NM_030927 |
| Nearest Ensembl: | ENSG00000108219 |
| Gene Name: | tetraspanin 14 |
| Gene Alias: | DC-TM4F2|TM4SF14|tspan-14 |
| Gene Description: | tetraspanin 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.195 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
