Difference between revisions of "TSS:Hg 105878.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=14457 |entrez_id=81619 |gc_percent=0.412935 |gene_alias=DC-TM4F2|TM4SF14 |gene_description=tetraspanin 14 |gene_name=TSPAN14 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TM4SF14= | ||
| + | |all_trans=NM_001351271:-496 NM_001351272:-496 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=-496 |
| + | |distance_to_tss=476 | ||
| + | |end=80468741 | ||
| + | |end_of_center_position=80468739 | ||
|entrez_id=81619 | |entrez_id=81619 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
| − | |gene_alias=DC-TM4F2 | + | |gene_alias=DC-TM4F2{{!}}TM4SF14{{!}}tspan-14 |
|gene_description=tetraspanin 14 | |gene_description=tetraspanin 14 | ||
| − | |gene_name=TSPAN14 | + | |gene_id=81619 |
| + | |gene_name=tetraspanin 14 | ||
| + | |gene_source=HGNC:23303 | ||
| + | |gene_symbol=TSPAN14 | ||
| + | |gene_synonyms=DC-TM4F2 MGC11352 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23303 | ||
|nearest_ensembl=ENSG00000108219 | |nearest_ensembl=ENSG00000108219 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351272 |
|nearest_refseq=NM_030927 | |nearest_refseq=NM_030927 | ||
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.308615 |
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=80468736 | ||
| + | |start_of_center_position=80468738 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_001351271.2 NM_001351272.2 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105878.1 | |tss_id=hg_105878.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:40, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 80468738 |
|---|---|
| End of the center position in the TSS region: | 80468739 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001351271.2 NM_001351272.2 |
|---|---|
| Distance: | -496 |
| Num_trans: | 2 |
| All_trans: | NM_001351271:-496 NM_001351272:-496 |
TATA-Box annotation
| Distance to TSS: | 476 |
|---|---|
| Nearest PromoterID: | NM_001351272 |
| Entrez ID: | 81619 |
| Nearest Unigene: | Hs.308615 |
| Nearest Refseq: | NM_030927 |
| Nearest Ensembl: | ENSG00000108219 |
| Gene Name: | tetraspanin 14 |
| Gene Alias: | DC-TM4F2|TM4SF14|tspan-14 |
| Gene Description: | tetraspanin 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
