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Difference between revisions of "TSS:Hg 105906.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=DQ338459:243 AK296563:-339 ENST00000404547.5:-490 uc021pvc.2:-490 DQ001411:-490 HM068873:-490 HM068874:-490
+
|all_trans=HGNC:7999
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.115
 
|cpg_percent=0.115
Line 9: Line 9:
 
|entrez_id=10718
 
|entrez_id=10718
 
|gc_percent=0.751244
 
|gc_percent=0.751244
|gene_alias=HRG3
+
|gene_alias=HRG3{{!}}pro-NRG3
 
|gene_description=neuregulin 3
 
|gene_description=neuregulin 3
 
|gene_id=10718
 
|gene_id=10718
Line 19: Line 19:
 
|hgnc_mgi_id=HGNC:7999
 
|hgnc_mgi_id=HGNC:7999
 
|nearest_ensembl=ENSG00000185737
 
|nearest_ensembl=ENSG00000185737
|nearest_promoter_id=NM_001010848
+
|nearest_promoter_id=NM_001165972
 
|nearest_refseq=NM_001010848
 
|nearest_refseq=NM_001010848
 
|nearest_unigene=Hs.125119
 
|nearest_unigene=Hs.125119
|num_trans=7
+
|num_trans=10718
 
|pro-NRG3=
 
|pro-NRG3=
 
|species=human
 
|species=human

Latest revision as of 19:41, 19 July 2021

Basic information about the TSS


TSS ID:hg_105906.1
Species:human
Chr:chr10
TSS Classification:no
Start:81875830
End:81875841
Strand:+
TSS Score:1
Start of the center position in the TSS region:81875835
End of the center position in the TSS region:81875836



Gene and protein annotation


Transcript_name:DQ338459
Distance:243
GeneID:10718
HGNC/MGI_ID:HGNC:7999
UniProt_ID:Q2LC36
Gene_name:neuregulin 3
Gene_symbol:NRG3
Gene_synonyms:
Gene_source:HGNC:7999



Transcript annotation


Transcript_name:DQ338459
Distance:243
Num_trans:10718
All_trans:HGNC:7999



TATA-Box annotation


Distance to TSS:522
Nearest PromoterID:NM_001165972
Entrez ID:10718
Nearest Unigene:Hs.125119
Nearest Refseq:NM_001010848
Nearest Ensembl:ENSG00000185737
Gene Name:neuregulin 3
Gene Alias:HRG3|pro-NRG3
Gene Description:neuregulin 3
Gene Type:protein-coding
CpG%:0.115
GC%:0.751244
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):