Difference between revisions of "TSS:Hg 105957.1"
From referenceTSS
| (3 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|Gcap14= | |Gcap14= | ||
|KIAA1128= | |KIAA1128= | ||
| − | |all_trans= | + | |all_trans=HGNC:29197 |
|bA486O22.1= | |bA486O22.1= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-19 | |distance=-19 | ||
| − | |distance_to_tss= | + | |distance_to_tss=27071 |
|end=84452244 | |end=84452244 | ||
| + | |end_of_center_position=84452240 | ||
|entrez_id=54462 | |entrez_id=54462 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias=FAM190B | + | |gene_alias=FAM190B{{!}}Gcap14{{!}}KIAA1128{{!}}bA486O22.1 |
|gene_description=coiled-coil serine rich protein 2 | |gene_description=coiled-coil serine rich protein 2 | ||
|gene_id=54462 | |gene_id=54462 | ||
| Line 24: | Line 25: | ||
|nearest_refseq=NM_018999 | |nearest_refseq=NM_018999 | ||
|nearest_unigene=Hs.461988 | |nearest_unigene=Hs.461988 | ||
| − | |num_trans= | + | |num_trans=54462 |
|species=human | |species=human | ||
|start=84452235 | |start=84452235 | ||
| + | |start_of_center_position=84452239 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000466105.5 ENST00000480006 | + | |transcript_name=ENST00000466105.5 ENST00000480006.1 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_105957.1 | |tss_id=hg_105957.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A2R8Y7M2 A0A2R8YGE2 |
}} | }} | ||
Latest revision as of 19:42, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 84452239 |
|---|---|
| End of the center position in the TSS region: | 84452240 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000466105.5 ENST00000480006.1 |
|---|---|
| Distance: | -19 |
| Num_trans: | 54462 |
| All_trans: | HGNC:29197 |
TATA-Box annotation
| Distance to TSS: | 27071 |
|---|---|
| Nearest PromoterID: | NM_001284242 |
| Entrez ID: | 54462 |
| Nearest Unigene: | Hs.461988 |
| Nearest Refseq: | NM_018999 |
| Nearest Ensembl: | ENSG00000107771 |
| Gene Name: | coiled-coil serine rich protein 2 |
| Gene Alias: | FAM190B|Gcap14|KIAA1128|bA486O22.1 |
| Gene Description: | coiled-coil serine rich protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
