Difference between revisions of "TSS:Hg 106006.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=63 |entrez_id=6623 |gc_percent=0.676617 |gene_alias=BCSG1|SR |gene_description=synuclein gamma |gene_name=SNCG |gene_type=protei...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |SR= | ||
| + | |all_trans=HGNC:11141 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=-5 | ||
| + | |end=86958631 | ||
| + | |end_of_center_position=86958595 | ||
|entrez_id=6623 | |entrez_id=6623 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=BCSG1 | + | |gene_alias=BCSG1{{!}}SR |
|gene_description=synuclein gamma | |gene_description=synuclein gamma | ||
| − | |gene_name=SNCG | + | |gene_id=6623 |
| + | |gene_name=synuclein gamma | ||
| + | |gene_source=HGNC:11141 | ||
| + | |gene_symbol=SNCG | ||
| + | |gene_synonyms=BCSG1 SR persyn | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11141 | ||
|nearest_ensembl=ENSG00000173267 | |nearest_ensembl=ENSG00000173267 | ||
|nearest_promoter_id=NM_003087 | |nearest_promoter_id=NM_003087 | ||
|nearest_refseq=NM_003087 | |nearest_refseq=NM_003087 | ||
|nearest_unigene=Hs.349470 | |nearest_unigene=Hs.349470 | ||
| + | |num_trans=6623 | ||
| + | |species=human | ||
| + | |start=86958557 | ||
| + | |start_of_center_position=86958594 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000372017.4 ENST00000465679.5 ENST00000348795.8 AK223367 BC014098 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106006.1 | |tss_id=hg_106006.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=F8W754 Q6FHG5 | ||
}} | }} | ||
Latest revision as of 19:43, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86958594 |
|---|---|
| End of the center position in the TSS region: | 86958595 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372017.4 ENST00000465679.5 ENST00000348795.8 AK223367 BC014098 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6623 |
| All_trans: | HGNC:11141 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_003087 |
| Entrez ID: | 6623 |
| Nearest Unigene: | Hs.349470 |
| Nearest Refseq: | NM_003087 |
| Nearest Ensembl: | ENSG00000173267 |
| Gene Name: | synuclein gamma |
| Gene Alias: | BCSG1|SR |
| Gene Description: | synuclein gamma |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
