Difference between revisions of "TSS:Hg 106012.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|APM2= | |APM2= | ||
|C10orf116= | |C10orf116= | ||
| − | |all_trans= | + | |all_trans=HGNC:24043 |
|apM-2= | |apM-2= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=86968488 | |end=86968488 | ||
| + | |end_of_center_position=86968481 | ||
|entrez_id=10974 | |entrez_id=10974 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=AFRO | + | |gene_alias=AFRO{{!}}APM2{{!}}C10orf116{{!}}apM-2 |
|gene_description=adipogenesis regulatory factor | |gene_description=adipogenesis regulatory factor | ||
|gene_id=10974 | |gene_id=10974 | ||
| Line 24: | Line 25: | ||
|nearest_refseq=NM_006829 | |nearest_refseq=NM_006829 | ||
|nearest_unigene=Hs.642660 | |nearest_unigene=Hs.642660 | ||
| − | |num_trans= | + | |num_trans=10974 |
|species=human | |species=human | ||
|start=86968473 | |start=86968473 | ||
| + | |start_of_center_position=86968480 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-34(CGCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCG,+,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000372013.8 AK312031 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106012.1 | |tss_id=hg_106012.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q5TBU5 |
}} | }} | ||
Latest revision as of 19:43, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 86968480 |
|---|---|
| End of the center position in the TSS region: | 86968481 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372013.8 AK312031 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10974 |
| All_trans: | HGNC:24043 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_006829 |
| Entrez ID: | 10974 |
| Nearest Unigene: | Hs.642660 |
| Nearest Refseq: | NM_006829 |
| Nearest Ensembl: | ENSG00000148671 |
| Gene Name: | adipogenesis regulatory factor |
| Gene Alias: | AFRO|APM2|C10orf116|apM-2 |
| Gene Description: | adipogenesis regulatory factor |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(CGCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCG,+,0.00) |
