Difference between revisions of "TSS:Hg 106013.1"
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000433214.2 | + | |all_trans=NM_133447:0 ENST00000433214.2:366 AK097165:366 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=17 |
|end=86970375 | |end=86970375 | ||
|end_of_center_position=86970354 | |end_of_center_position=86970354 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=ArfGAP with GTPase domain, ankyrin repeat and PH domain 11 |
|gene_id=119385 | |gene_id=119385 | ||
| − | |gene_name= | + | |gene_name=ArfGAP with GTPase domain, ankyrin repeat and PH domain 11 |
|gene_source=HGNC:29421 | |gene_source=HGNC:29421 | ||
|gene_symbol=AGAP11 | |gene_symbol=AGAP11 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_133447 | |nearest_refseq=NM_133447 | ||
|nearest_unigene=Hs.511787 | |nearest_unigene=Hs.511787 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=86970331 | |start=86970331 | ||
|start_of_center_position=86970353 | |start_of_center_position=86970353 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NR_171046.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106013.1 | |tss_id=hg_106013.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 19:43, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 86970353 |
|---|---|
| End of the center position in the TSS region: | 86970354 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NR_171046.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | NM_133447:0 ENST00000433214.2:366 AK097165:366 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_133447 |
| Entrez ID: | 119385 |
| Nearest Unigene: | Hs.511787 |
| Nearest Refseq: | NM_133447 |
| Nearest Ensembl: | |
| Gene Name: | ArfGAP with GTPase domain, ankyrin repeat and PH domain 11 |
| Gene Alias: | - |
| Gene Description: | ArfGAP with GTPase domain, ankyrin repeat and PH domain 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
