Difference between revisions of "TSS:Hg 106015.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:23436 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=87020294 | |end=87020294 | ||
| + | |end_of_center_position=87020294 | ||
|entrez_id=643161 | |entrez_id=643161 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001146157 | |nearest_refseq=NM_001146157 | ||
|nearest_unigene=Hs.729945 | |nearest_unigene=Hs.729945 | ||
| − | |num_trans= | + | |num_trans=643161 |
|species=human | |species=human | ||
|start=87020292 | |start=87020292 | ||
| + | |start_of_center_position=87020293 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-31(AGCTATAAAAGC,-,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000343959.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_106015.1 | |tss_id=hg_106015.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B3EWG6 | + | |uniprot_id=B3EWG3 B3EWG6 |
}} | }} | ||
Latest revision as of 19:43, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 87020293 |
|---|---|
| End of the center position in the TSS region: | 87020294 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000343959.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 643161 |
| All_trans: | HGNC:23436 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001146157 |
| Entrez ID: | 643161 |
| Nearest Unigene: | Hs.729945 |
| Nearest Refseq: | NM_001146157 |
| Nearest Ensembl: | ENSG00000188100 |
| Gene Name: | family with sequence similarity 25 member A |
| Gene Alias: | bA96C23.5 |
| Gene Description: | family with sequence similarity 25 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -31(AGCTATAAAAGC,-,0.00) |
