Difference between revisions of "TSS:Hg 106030.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:28560 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=11 | |distance_to_tss=11 | ||
|end=87818342 | |end=87818342 | ||
| + | |end_of_center_position=87818324 | ||
|entrez_id=142913 | |entrez_id=142913 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_028492 | |nearest_refseq=NR_028492 | ||
|nearest_unigene=Hs.369431 | |nearest_unigene=Hs.369431 | ||
| − | |num_trans= | + | |num_trans=142913 |
|species=human | |species=human | ||
|start=87818305 | |start=87818305 | ||
| + | |start_of_center_position=87818323 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000438248.1 | + | |transcript_name=ENST00000438248.1 BC031631 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106030.1 | |tss_id=hg_106030.1 | ||
Latest revision as of 19:44, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 87818323 |
|---|---|
| End of the center position in the TSS region: | 87818324 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000438248.1 BC031631 |
|---|---|
| Distance: | 0 |
| Num_trans: | 142913 |
| All_trans: | HGNC:28560 |
TATA-Box annotation
| Distance to TSS: | 11 |
|---|---|
| Nearest PromoterID: | NR_028492 |
| Entrez ID: | 142913 |
| Nearest Unigene: | Hs.369431 |
| Nearest Refseq: | NR_028492 |
| Nearest Ensembl: | ENSG00000223820 |
| Gene Name: | cofilin 1 pseudogene 1 |
| Gene Alias: | CFLP1 |
| Gene Description: | cofilin 1 pseudogene 1 |
| Gene Type: | pseudo |
| CpG%: | 0.115 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
