Personal tools

Difference between revisions of "TSS:Hg 106103.1"

From referenceTSS

Jump to: navigation, search
 
Line 9: Line 9:
 
|ISG54=
 
|ISG54=
 
|P54=
 
|P54=
|all_trans=ENST00000681850.1:14 ENST00000638108.1:14 ENST00000680546.1:-28 ENST00000681179.1:56 ENST00000354541.7:85 ENST00000680136.1:95 ENST00000679653.1:119 ENST00000448897.1:119 ENST00000437032.1:126
+
|all_trans=HGNC:5409
 
|chr=chr10
 
|chr=chr10
 
|cig42=
 
|cig42=
Line 32: Line 32:
 
|nearest_refseq=NM_001547
 
|nearest_refseq=NM_001547
 
|nearest_unigene=Hs.437609
 
|nearest_unigene=Hs.437609
|num_trans=9
+
|num_trans=3433
 
|species=human
 
|species=human
 
|start=89283663
 
|start=89283663

Latest revision as of 19:45, 19 July 2021

Basic information about the TSS


TSS ID:hg_106103.1
Species:human
Chr:chr10
TSS Classification:yes
Start:89283663
End:89283680
Strand:+
TSS Score:1
Start of the center position in the TSS region:89283671
End of the center position in the TSS region:89283672



Gene and protein annotation


Transcript_name:ENST00000681850.1 ENST00000638108.1
Distance:14
GeneID:3433
HGNC/MGI_ID:HGNC:5409
UniProt_ID:P09913
Gene_name:interferon induced protein with tetratricopeptide repeats 2
Gene_symbol:IFIT2
Gene_synonyms:GARG-39 IFI-54 ISG-54 ISG-54K cig42
Gene_source:HGNC:5409



Transcript annotation


Transcript_name:ENST00000681850.1 ENST00000638108.1
Distance:14
Num_trans:3433
All_trans:HGNC:5409



TATA-Box annotation


Distance to TSS:-18374
Nearest PromoterID:NM_001547
Entrez ID:3433
Nearest Unigene:Hs.437609
Nearest Refseq:NM_001547
Nearest Ensembl:ENSG00000119922
Gene Name:interferon induced protein with tetratricopeptide repeats 2
Gene Alias:G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42
Gene Description:interferon induced protein with tetratricopeptide repeats 2
Gene Type:protein-coding
CpG%:0.005
GC%:0.427861
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):