Difference between revisions of "TSS:Hg 10623.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:27006 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance=- | + | |distance=-38 |
| − | |distance_to_tss= | + | |distance_to_tss=46 |
|end=18956638 | |end=18956638 | ||
| + | |end_of_center_position=18956631 | ||
|entrez_id=126917 | |entrez_id=126917 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001136265 | |nearest_refseq=NM_001136265 | ||
|nearest_unigene=Hs.466625 | |nearest_unigene=Hs.466625 | ||
| − | |num_trans= | + | |num_trans=126917 |
|species=human | |species=human | ||
|start=18956622 | |start=18956622 | ||
| + | |start_of_center_position=18956630 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000455833. | + | |transcript_name=ENST00000455833.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10623.1 | |tss_id=hg_10623.1 | ||
Latest revision as of 19:48, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 18956630 |
|---|---|
| End of the center position in the TSS region: | 18956631 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000455833.7 |
|---|---|
| Distance: | -38 |
| Num_trans: | 126917 |
| All_trans: | HGNC:27006 |
TATA-Box annotation
| Distance to TSS: | 46 |
|---|---|
| Nearest PromoterID: | NM_001136265 |
| Entrez ID: | 126917 |
| Nearest Unigene: | Hs.466625 |
| Nearest Refseq: | NM_001136265 |
| Nearest Ensembl: | ENSG00000169991 |
| Gene Name: | intermediate filament family orphan 2 |
| Gene Alias: | - |
| Gene Description: | intermediate filament family orphan 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
