Difference between revisions of "TSS:Hg 1065.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|CAPPB= | |CAPPB= | ||
|CAPZ= | |CAPZ= | ||
| − | |all_trans= | + | |all_trans=HGNC:46964 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-25054 |
|end=19510594 | |end=19510594 | ||
| + | |end_of_center_position=19510594 | ||
|entrez_id=832 | |entrez_id=832 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| − | |gene_alias=CAPB | + | |gene_alias=CAPB{{!}}CAPPB{{!}}CAPZ |
| − | |gene_description=capping actin protein of muscle Z-line beta | + | |gene_description=capping actin protein of muscle Z-line subunit beta |
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=RNA, U4 small nuclear 28, pseudogene |
|gene_source=HGNC:46964 | |gene_source=HGNC:46964 | ||
|gene_symbol=RNU4-28P | |gene_symbol=RNU4-28P | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:46964 | |hgnc_mgi_id=HGNC:46964 | ||
|nearest_ensembl=ENSG00000077549 | |nearest_ensembl=ENSG00000077549 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001206540 |
|nearest_refseq=NM_004930 | |nearest_refseq=NM_004930 | ||
|nearest_unigene=Hs.432760 | |nearest_unigene=Hs.432760 | ||
| − | |num_trans= | + | |num_trans= |
|species=human | |species=human | ||
|start=19510592 | |start=19510592 | ||
| + | |start_of_center_position=19510593 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000364739 | + | |transcript_name=ENST00000364739.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_1065.1 | |tss_id=hg_1065.1 | ||
Latest revision as of 19:54, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 19510593 |
|---|---|
| End of the center position in the TSS region: | 19510594 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000364739.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | |
| All_trans: | HGNC:46964 |
TATA-Box annotation
| Distance to TSS: | -25054 |
|---|---|
| Nearest PromoterID: | NM_001206540 |
| Entrez ID: | 832 |
| Nearest Unigene: | Hs.432760 |
| Nearest Refseq: | NM_004930 |
| Nearest Ensembl: | ENSG00000077549 |
| Gene Name: | RNA, U4 small nuclear 28, pseudogene |
| Gene Alias: | CAPB|CAPPB|CAPZ |
| Gene Description: | capping actin protein of muscle Z-line subunit beta |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
