Difference between revisions of "TSS:Hg 106654.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|TCL3= | |TCL3= | ||
| − | |all_trans= | + | |all_trans=HGNC:5056 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=6 |
|end=101131321 | |end=101131321 | ||
| + | |end_of_center_position=101131307 | ||
|entrez_id=3195 | |entrez_id=3195 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=HOX11 | + | |gene_alias=HOX11{{!}}TCL3 |
| − | |gene_description=T | + | |gene_description=T cell leukemia homeobox 1 |
|gene_id=3195 | |gene_id=3195 | ||
| − | |gene_name=T | + | |gene_name=T cell leukemia homeobox 1 |
|gene_source=HGNC:5056 | |gene_source=HGNC:5056 | ||
|gene_symbol=TLX1 | |gene_symbol=TLX1 | ||
| Line 22: | Line 23: | ||
|nearest_refseq=NM_005521 | |nearest_refseq=NM_005521 | ||
|nearest_unigene=Hs.89583 | |nearest_unigene=Hs.89583 | ||
| − | |num_trans= | + | |num_trans=3195 |
|species=human | |species=human | ||
|start=101131291 | |start=101131291 | ||
| + | |start_of_center_position=101131306 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000467928 | + | |transcript_name=ENST00000370196.11 ENST00000467928.2 BC130530 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106654.1 | |tss_id=hg_106654.1 | ||
Latest revision as of 19:58, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 101131306 |
|---|---|
| End of the center position in the TSS region: | 101131307 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000370196.11 ENST00000467928.2 BC130530 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3195 |
| All_trans: | HGNC:5056 |
TATA-Box annotation
| Distance to TSS: | 6 |
|---|---|
| Nearest PromoterID: | NM_001195517 |
| Entrez ID: | 3195 |
| Nearest Unigene: | Hs.89583 |
| Nearest Refseq: | NM_005521 |
| Nearest Ensembl: | ENSG00000107807 |
| Gene Name: | T cell leukemia homeobox 1 |
| Gene Alias: | HOX11|TCL3 |
| Gene Description: | T cell leukemia homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
