Difference between revisions of "TSS:Hg 10675.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |CAPPB= | ||
| + | |CAPZ= | ||
| + | |all_trans=HGNC:1491 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance_to_tss= | + | |distance=-270 |
| + | |distance_to_tss=350 | ||
| + | |end=19485207 | ||
| + | |end_of_center_position=19485190 | ||
|entrez_id=832 | |entrez_id=832 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=CAPB | + | |gene_alias=CAPB{{!}}CAPPB{{!}}CAPZ |
| − | |gene_description=capping actin protein of muscle Z-line beta subunit | + | |gene_description=capping actin protein of muscle Z-line subunit beta |
| − | | | + | |gene_id=832 |
| + | |gene_name=capping actin protein of muscle Z-line subunit beta | ||
| + | |gene_source=HGNC:1491 | ||
| + | |gene_symbol=CAPZB | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1491 | ||
|nearest_ensembl=ENSG00000077549 | |nearest_ensembl=ENSG00000077549 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_004930 |
|nearest_refseq=NM_004930 | |nearest_refseq=NM_004930 | ||
|nearest_unigene=Hs.432760 | |nearest_unigene=Hs.432760 | ||
| + | |num_trans=832 | ||
| + | |species=human | ||
| + | |start=19485171 | ||
| + | |start_of_center_position=19485189 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000674449.1 AK313113 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10675.1 | |tss_id=hg_10675.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A6I8PIN8 B2R7T8 | ||
}} | }} | ||
Latest revision as of 20:00, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 19485189 |
|---|---|
| End of the center position in the TSS region: | 19485190 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000674449.1 AK313113 |
|---|---|
| Distance: | -270 |
| Num_trans: | 832 |
| All_trans: | HGNC:1491 |
TATA-Box annotation
| Distance to TSS: | 350 |
|---|---|
| Nearest PromoterID: | NM_004930 |
| Entrez ID: | 832 |
| Nearest Unigene: | Hs.432760 |
| Nearest Refseq: | NM_004930 |
| Nearest Ensembl: | ENSG00000077549 |
| Gene Name: | capping actin protein of muscle Z-line subunit beta |
| Gene Alias: | CAPB|CAPPB|CAPZ |
| Gene Description: | capping actin protein of muscle Z-line subunit beta |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
