Difference between revisions of "TSS:Hg 10678.1"
From referenceTSS
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|CAPPB= | |CAPPB= | ||
|CAPZ= | |CAPZ= | ||
| − | |all_trans= | + | |all_trans=HGNC:1491 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=11 |
|end=19485554 | |end=19485554 | ||
| + | |end_of_center_position=19485529 | ||
|entrez_id=832 | |entrez_id=832 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=CAPB | + | |gene_alias=CAPB{{!}}CAPPB{{!}}CAPZ |
| − | |gene_description=capping actin protein of muscle Z-line beta | + | |gene_description=capping actin protein of muscle Z-line subunit beta |
|gene_id=832 | |gene_id=832 | ||
| − | |gene_name=capping actin protein of muscle Z-line beta | + | |gene_name=capping actin protein of muscle Z-line subunit beta |
|gene_source=HGNC:1491 | |gene_source=HGNC:1491 | ||
|gene_symbol=CAPZB | |gene_symbol=CAPZB | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:1491 | |hgnc_mgi_id=HGNC:1491 | ||
|nearest_ensembl=ENSG00000077549 | |nearest_ensembl=ENSG00000077549 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_004930 |
|nearest_refseq=NM_004930 | |nearest_refseq=NM_004930 | ||
|nearest_unigene=Hs.432760 | |nearest_unigene=Hs.432760 | ||
| − | |num_trans= | + | |num_trans=832 |
|species=human | |species=human | ||
|start=19485502 | |start=19485502 | ||
| + | |start_of_center_position=19485528 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000264203.7 | + | |transcript_name=ENST00000264202.8 ENST00000264203.7 ENST00000482808.2 ENST00000375144.6 ENST00000674432.1 ENST00000459967.6 AK125085 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10678.1 | |tss_id=hg_10678.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B1AK85 | + | |uniprot_id=A0A384MR50 B1AK85 B1AK87 Q7L4N0 |
}} | }} | ||
Latest revision as of 20:00, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19485528 |
|---|---|
| End of the center position in the TSS region: | 19485529 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000264202.8 ENST00000264203.7 ENST00000482808.2 ENST00000375144.6 ENST00000674432.1 ENST00000459967.6 AK125085 |
|---|---|
| Distance: | 0 |
| Num_trans: | 832 |
| All_trans: | HGNC:1491 |
TATA-Box annotation
| Distance to TSS: | 11 |
|---|---|
| Nearest PromoterID: | NM_004930 |
| Entrez ID: | 832 |
| Nearest Unigene: | Hs.432760 |
| Nearest Refseq: | NM_004930 |
| Nearest Ensembl: | ENSG00000077549 |
| Gene Name: | capping actin protein of muscle Z-line subunit beta |
| Gene Alias: | CAPB|CAPPB|CAPZ |
| Gene Description: | capping actin protein of muscle Z-line subunit beta |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
