Difference between revisions of "TSS:Hg 107373.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|PPAPDC1= | |PPAPDC1= | ||
|PPAPDC1A= | |PPAPDC1A= | ||
| − | |all_trans= | + | |all_trans=HGNC:23531 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 11: | Line 11: | ||
|entrez_id=196051 | |entrez_id=196051 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=DPPL2 | + | |gene_alias=DPPL2{{!}}PPAPDC1{{!}}PPAPDC1A |
|gene_description=phospholipid phosphatase 4 | |gene_description=phospholipid phosphatase 4 | ||
|gene_id=196051 | |gene_id=196051 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:23531 | |hgnc_mgi_id=HGNC:23531 | ||
|nearest_ensembl=ENSG00000203805 | |nearest_ensembl=ENSG00000203805 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001030059 |
|nearest_refseq=NM_001030059 | |nearest_refseq=NM_001030059 | ||
|nearest_unigene=Hs.40479 | |nearest_unigene=Hs.40479 | ||
| − | |num_trans= | + | |num_trans=196051 |
|species=human | |species=human | ||
|start=120457195 | |start=120457195 | ||
|start_of_center_position=120457236 | |start_of_center_position=120457236 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000398250.6 AK296273 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_107373.1 | |tss_id=hg_107373.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B7Z3R3 Q5VZY2 |
}} | }} | ||
Latest revision as of 20:13, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120457236 |
|---|---|
| End of the center position in the TSS region: | 120457237 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000398250.6 AK296273 |
|---|---|
| Distance: | 0 |
| Num_trans: | 196051 |
| All_trans: | HGNC:23531 |
TATA-Box annotation
| Distance to TSS: | 283 |
|---|---|
| Nearest PromoterID: | NM_001030059 |
| Entrez ID: | 196051 |
| Nearest Unigene: | Hs.40479 |
| Nearest Refseq: | NM_001030059 |
| Nearest Ensembl: | ENSG00000203805 |
| Gene Name: | phospholipid phosphatase 4 |
| Gene Alias: | DPPL2|PPAPDC1|PPAPDC1A |
| Gene Description: | phospholipid phosphatase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
