Difference between revisions of "TSS:Hg 108143.1"
From referenceTSS
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| Line 4: | Line 4: | ||
|IMD41= | |IMD41= | ||
|TCGFR= | |TCGFR= | ||
| − | |all_trans= | + | |all_trans=HGNC:6008 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 10: | Line 10: | ||
|distance_to_tss=-150 | |distance_to_tss=-150 | ||
|end=6062522 | |end=6062522 | ||
| + | |end_of_center_position=6062520 | ||
|entrez_id=3559 | |entrez_id=3559 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=CD25 | + | |gene_alias=CD25{{!}}IDDM10{{!}}IL2R{{!}}IMD41{{!}}TCGFR{{!}}p55 |
|gene_description=interleukin 2 receptor subunit alpha | |gene_description=interleukin 2 receptor subunit alpha | ||
|gene_id=3559 | |gene_id=3559 | ||
| Line 22: | Line 23: | ||
|hgnc_mgi_id=HGNC:6008 | |hgnc_mgi_id=HGNC:6008 | ||
|nearest_ensembl=ENSG00000134460 | |nearest_ensembl=ENSG00000134460 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000417 |
|nearest_refseq=NM_000417 | |nearest_refseq=NM_000417 | ||
|nearest_unigene=Hs.231367 | |nearest_unigene=Hs.231367 | ||
| − | |num_trans= | + | |num_trans=3559 |
|p55= | |p55= | ||
|species=human | |species=human | ||
|start=6062517 | |start=6062517 | ||
| + | |start_of_center_position=6062519 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-44(CCTTTTATGGGC,+,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000644262.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_108143.1 | |tss_id=hg_108143.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 20:30, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6062519 |
|---|---|
| End of the center position in the TSS region: | 6062520 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000644262.1 |
|---|---|
| Distance: | 148 |
| Num_trans: | 3559 |
| All_trans: | HGNC:6008 |
TATA-Box annotation
| Distance to TSS: | -150 |
|---|---|
| Nearest PromoterID: | NM_000417 |
| Entrez ID: | 3559 |
| Nearest Unigene: | Hs.231367 |
| Nearest Refseq: | NM_000417 |
| Nearest Ensembl: | ENSG00000134460 |
| Gene Name: | interleukin 2 receptor subunit alpha |
| Gene Alias: | CD25|IDDM10|IL2R|IMD41|TCGFR|p55 |
| Gene Description: | interleukin 2 receptor subunit alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -44(CCTTTTATGGGC,+,0.00) |
