Difference between revisions of "TSS:Hg 109097.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |Baz= | ||
| + | |PAR3= | ||
| + | |PAR3alpha= | ||
| + | |PARD-3= | ||
| + | |PARD3A= | ||
| + | |PPP1R118= | ||
| + | |SE2-5L16= | ||
| + | |SE2-5LT1= | ||
| + | |SE2-5T2= | ||
| + | |all_trans=HGNC:16051 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=-2 | ||
| + | |end=34815339 | ||
| + | |end_of_center_position=34815299 | ||
|entrez_id=56288 | |entrez_id=56288 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=ASIP | + | |gene_alias=ASIP{{!}}Baz{{!}}PAR3{{!}}PAR3alpha{{!}}PARD-3{{!}}PARD3A{{!}}PPP1R118{{!}}SE2-5L16{{!}}SE2-5LT1{{!}}SE2-5T2 |
|gene_description=par-3 family cell polarity regulator | |gene_description=par-3 family cell polarity regulator | ||
| − | |gene_name=PARD3 | + | |gene_id=56288 |
| + | |gene_name=par-3 family cell polarity regulator | ||
| + | |gene_source=HGNC:16051 | ||
| + | |gene_symbol=PARD3 | ||
| + | |gene_synonyms=ASIP Baz Bazooka PAR3 PARD3A PPP1R118 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16051 | ||
|nearest_ensembl=ENSG00000148498 | |nearest_ensembl=ENSG00000148498 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001184787 |
|nearest_refseq=NM_019619 | |nearest_refseq=NM_019619 | ||
|nearest_unigene=Hs.131489 | |nearest_unigene=Hs.131489 | ||
| + | |num_trans=56288 | ||
| + | |species=human | ||
| + | |start=34815257 | ||
| + | |start_of_center_position=34815298 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000545260.5 ENST00000545693.5 ENST00000374789.8 ENST00000374788.8 ENST00000346874.9 ENST00000374794.8 ENST00000350537.9 ENST00000374790.8 ENST00000374776.6 ENST00000340077.9 ENST00000374773.6 AF196185 BC071566 AF196186 AF454058 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_109097.1 | |tss_id=hg_109097.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5VWU8 Q5VWV2 Q8IX27 Q8TEW0 | ||
}} | }} | ||
Latest revision as of 20:50, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34815298 |
|---|---|
| End of the center position in the TSS region: | 34815299 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000545260.5 ENST00000545693.5 ENST00000374789.8 ENST00000374788.8 ENST00000346874.9 ENST00000374794.8 ENST00000350537.9 ENST00000374790.8 ENST00000374776.6 ENST00000340077.9 ENST00000374773.6 AF196185 BC071566 AF196186 AF454058 |
|---|---|
| Distance: | 0 |
| Num_trans: | 56288 |
| All_trans: | HGNC:16051 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_001184787 |
| Entrez ID: | 56288 |
| Nearest Unigene: | Hs.131489 |
| Nearest Refseq: | NM_019619 |
| Nearest Ensembl: | ENSG00000148498 |
| Gene Name: | par-3 family cell polarity regulator |
| Gene Alias: | ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 |
| Gene Description: | par-3 family cell polarity regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
